RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 LOC105369274A0A096LPK9 316 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 LOC102723532A0A0G2JNH3 316 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 NPIPB8E9PQR5 432 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 NTN3O00634 580 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 UBDO15205 165 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 TOX3O15405 576 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 P2RX6O15547 441 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 TBX6O95947 436 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 EIF2S1P05198 315 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 SERPINA6P08185 405 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 SLC35G6P0C7Q6 338 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 THRAP10827 490 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 PRPH2P23942 346 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 VSX2P58304 361 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 ERVK-8P63133 956 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 HSD11B2P80365 405 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 ACSM2AQ08AH3 577 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 MAD2L1Q13257 205 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 TOR1AIP1Q5JTV8 583 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 ACSM2BQ68CK6 577 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 OGFOD2Q6N063 350 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 CHSY3Q70JA7 882 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 SPATA19Q7Z5L4 167 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 PIP4P1Q86T03 277 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 KMT5CQ86Y97 462 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 MCATQ8IVS2 390 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 OR4N4Q8N0Y3 316 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 DNAJC22Q8N4W6 341 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 CSNK1A1LQ8N752 337 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 CAMKVQ8NCB2 501 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 WDR48Q8TAF3 677 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 NT5CQ8TCD5 201 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 N4BP2L2Q92802 583 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 APIPQ96GX9 242 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 CCDC74BQ96LY2 380 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 F2RL3Q96RI0 385 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 MACROD1Q9BQ69 325 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 MRPL1Q9BYD6 325 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 CHRNA10Q9GZZ6 450 aa14.72□□□□□ -0.05
HERPUD1-219ENST00000570273 ASCC3Q8N3C0 2202 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 IGHV5-10-1A0A0J9YXX1 117 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 FCHO1O14526 889 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 CCDC22O60826 627 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 RFPL3O75679 317 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 SEMA3DO95025 777 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 ALDOCP09972 364 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 ANKRD34CP0C6C1 535 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 HNRNPH1P31943 449 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 STXBP1P61764 594 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 EMX2Q04743 252 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 TBL3Q12788 808 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 PWP1Q13610 501 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 CUL3Q13618 768 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 KCNAB1Q14722 419 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 SMU1Q2TAY7 513 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 TMEM35AQ53FP2 167 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 SPIN4Q56A73 249 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 TMTC4Q5T4D3 741 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 PHF19Q5T6S3 580 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 DEPDC1Q5TB30 811 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 METTL21CQ5VZV1 264 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 ZNF574Q6ZN55 896 aaPredicted RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 MTDHQ86UE4 582 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 C1orf52Q8N6N3 182 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 ZNF655Q8N720 491 aaPredicted RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 KLHL6Q8WZ60 621 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 SLC41A2Q96JW4 573 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 NLNQ9BYT8 704 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 NMUR2Q9GZQ4 415 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 REXO4Q9GZR2 422 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 ZNF768Q9H5H4 540 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 IRAK4Q9NWZ3 460 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 PLCL2Q9UPR0 1127 aa14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 EIF3LQ9Y262 564 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-219ENST00000570273 RP1P56715 2156 aa14.71□□□□□ -0.06
HERPUD1-219ENST00000570273 HEATR5BQ9P2D3 2071 aa14.71□□□□□ -0.06
HERPUD1-219ENST00000570273 LRIT2A6NDA9 550 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 HCRTR1O43613 425 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 RRP9O43818 475 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 MYO1DO94832 1006 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 NELFEP18615 380 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 MAPK1P28482 360 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 STX1BP61266 288 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 ILKQ13418 452 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 UBAP2LQ14157 1087 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 RFTN2Q52LD8 501 aaPredicted RBP14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 IL23RQ5VWK5 629 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 COMMD6Q7Z4G1 85 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 SLITRK4Q8IW52 837 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 METTL4Q8N3J2 472 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 D2HGDHQ8N465 521 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 DEFB124Q8NES8 71 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 ZCCHC10Q8TBK6 192 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 CHTF18Q8WVB6 975 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 TM4SF19Q96DZ7 209 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 EBPLQ9BY08 206 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 SLC6A16Q9GZN6 736 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 AIG1Q9NVV5 245 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 AHSPQ9NZD4 102 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms