RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 BHLHE22Q8NFJ8 381 aaPredicted RBP10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 LMX1AQ8TE12 382 aa10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 SLC26A7Q8TE54 656 aa10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 OR2A14Q96R47 310 aa10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 CGREF1Q99674 301 aa10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 IKZF5Q9H5V7 419 aa10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 PIF1Q9H611 641 aa10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 SUCOQ9UBS9 1254 aaKnown RBP10.46□□□□□ -0.73
PDXDC1-216ENST00000569715 TRBC2A0A5B9 178 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 GSAPA4D1B5 854 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 SCAMP2O15127 329 aaKnown RBP10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 C1QCP02747 245 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 LAMP1P11279 417 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 PIM1P11309 404 aaPredicted RBP10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 COX7A2P14406 83 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 UGT2B7P16662 529 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 CMPK1P30085 196 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 GRIA3P42263 894 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 WNT3P56703 355 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 SESN3P58005 492 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 ABATP80404 500 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 CCDC6Q16204 474 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 DEPDC1Q5TB30 811 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 PRMT9Q6P2P2 845 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.46□□□□□ -0.745e-12■■■■■ 27.2
PDXDC1-216ENST00000569715 TWSG1Q9GZX9 223 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 DCLRE1BQ9H816 532 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 NT5DC2Q9H857 520 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 TMEM184CQ9NVA4 438 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 NMRK1Q9NWW6 199 aa10.46□□□□□ -0.74
PDXDC1-216ENST00000569715 KIR2DS5A0A0G2JLQ3 304 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 A0A0G2JNG1 304 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 KIR2DS3K7RE56 304 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 BCAS2O75934 225 aaPredicted RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 KCNH1O95259 989 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 GSNP06396 782 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 TPP2P29144 1249 aaPredicted RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 ZNF763Q0D2J5 394 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 KIR2DS5Q14953 304 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 ZNF385BQ569K4 471 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 UBE3DQ7Z6J8 389 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 MIEF2Q96C03 454 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 ASB9Q96DX5 294 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 AURKBQ96GD4 344 aaPredicted RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 KLHL31Q9H511 634 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 EVA1BQ9NVM1 165 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 SIRT5Q9NXA8 310 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 ERVK-11Q9UQG0 969 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 GABRR3A8MPY1 467 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 NDUFS4O43181 175 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 PRAMEF10O60809 474 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 MAGP20916 626 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 BSGP35613 385 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 KIR3DL1P43629 444 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 LSSP48449 732 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 HHEXQ03014 270 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 SIGLEC14Q08ET2 396 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 TRIM25Q14258 630 aaKnown RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 DGLUCYQ7Z3D6 616 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 ZNF438Q7Z4V0 828 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 IFNEQ86WN2 208 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 FAM9CQ8IZT9 166 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 AMER3Q8N944 861 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 C16orf78Q8WTQ4 265 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 DNASE2BQ8WZ79 361 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 PAIP1Q9H074 479 aaKnown RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 DUSP15Q9H1R2 295 aaPredicted RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 UCKL1Q9NWZ5 548 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 ACTR10Q9NZ32 417 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 EGFL7Q9UHF1 273 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 SCN2BO60939 215 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 TDGF1P13385 188 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 PTPN6P29350 595 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 GSK3BP49841 420 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 C21orf58P58505 322 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 TAS2R50P59544 299 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 MRPS22P82650 360 aaKnown RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 HYAL2Q12891 473 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 PRSS53Q2L4Q9 553 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 MUM1Q2TAK8 710 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 CYP2R1Q6VVX0 501 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 RNF111Q6ZNA4 994 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 GPR180Q86V85 440 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 PAQR7Q86WK9 346 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 CLECL1Q8IZS7 167 aa10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 ZNF548Q8NEK5 533 aaPredicted RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 PITHD1Q9GZP4 211 aaPredicted RBP10.45□□□□□ -0.74
PDXDC1-216ENST00000569715 CACNA1EQ15878 2313 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 TNRC6BQ9UPQ9 1833 aaKnown RBP10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 TRBV5-3A0A0A0MS03 114 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 CCNDBP1O95273 360 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 PVRP15151 417 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 HOXB9P17482 250 aaPredicted RBP10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 SNRPNP63162 240 aaKnown RBP10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 LIPEQ05469 1076 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 KIR2DS3Q14952 304 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 RSC1A1Q92681 617 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 NELL1Q92832 810 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 ALG2Q9H553 416 aa10.44□□□□□ -0.74
PDXDC1-216ENST00000569715 S100A14Q9HCY8 104 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms