RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 KRT34O76011 436 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 PLAUP00749 431 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 CALB1P05937 261 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 DANCRP0C864 163 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 XCR1P46094 333 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 AVPR1BP47901 424 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 SSR4P51571 173 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 DIO3P55073 304 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 OR4D2P58180 307 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 LSM11P83369 360 aaKnown RBP eCLIP6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 FMO1Q01740 532 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 RHAGQ02094 409 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 FOXF2Q12947 444 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 ABRAXAS2Q15018 415 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 DPYSL2Q16555 572 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 TYSND1Q2T9J0 566 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 HKDC1Q2TB90 917 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 CR1LQ2VPA4 569 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 BEX5Q5H9J7 111 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 ADAM5Q6NVV9 412 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 PHF13Q86YI8 300 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 CSNK1A1LQ8N752 337 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 LMNTD1Q8N9Z9 388 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 OR2L8Q8NGY9 312 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 OR51Q1Q8NH59 317 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 FAM71BQ8TC56 605 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 ENOX1Q8TC92 643 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 HEXDCQ8WVB3 486 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 DCUN1D1Q96GG9 259 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 DHTKD1Q96HY7 919 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 SCYL1Q96KG9 808 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 HS6ST2Q96MM7 605 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 ZFP3Q96NJ6 502 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 RBM4Q9BWF3 364 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 PRDM14Q9GZV8 571 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 VPS37BQ9H9H4 285 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 HPF1Q9NWY4 346 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 ERVK-11Q9UQG0 969 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 LIPT1Q9Y234 373 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 YARS2Q9Y2Z4 477 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 PCDHA13Q9Y5I0 950 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
HERPUD1-217ENST00000569429 SAGE2PA6NJ88 616 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 CFAP99D6REC4 459 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 TXNDC9O14530 226 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 MSTNO14793 375 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 LIN7AO14910 233 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 SNPHO15079 494 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 KLF4O43474 513 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 SSX4O60224 188 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 NRP2O60462 931 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 PHF2O75151 1096 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 RCBTB2O95199 551 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 NSA2O95478 260 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 F13A1P00488 732 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 SOD3P08294 240 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 ATP1A3P13637 1013 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 MIPP30301 263 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 NSFP46459 744 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 EEF1A1P68104 462 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 MEF2AQ02078 507 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 CRYZQ08257 329 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 CUL4AQ13619 759 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 SLC14A2Q15849 920 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 NRF1Q16656 503 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 IFI16Q16666 785 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 C8orf34Q49A92 452 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 EEF1A1P5Q5VTE0 462 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 CCDC70Q6NSX1 233 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 DNAJC24Q6P3W2 148 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 DCUN1D2Q6PH85 259 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 CLEC2AQ6UVW9 174 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 SYDE1Q6ZW31 735 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 RASGEF1CQ8N431 466 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 C2orf73Q8N5S3 287 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 CNTD1Q8N815 330 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 C9orf106Q8NAJ2 232 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 NFAM1Q8NET5 270 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 OR2L3Q8NG85 312 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 AKAP1Q92667 903 aaKnown RBP eCLIP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 SYN2Q92777 582 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 PROX1Q92786 737 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 TSLPQ969D9 159 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 CAVIN3Q969G5 261 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 TADA1Q96BN2 335 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 MSI2Q96DH6 328 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 IMP4Q96G21 291 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 GSDMAQ96QA5 445 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 TIMP4Q99727 224 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 AARSD1Q9BTE6 412 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 SLC6A15Q9H2J7 730 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 MED29Q9NX70 200 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 QPCTLQ9NXS2 382 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 TUBA8Q9NY65 449 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 GDF2Q9UK05 429 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 PKP3Q9Y446 797 aa6.06□□□□□ -1.44
HERPUD1-217ENST00000569429 FRG2CA6NGY1 282 aa6.05□□□□□ -1.44
HERPUD1-217ENST00000569429 ESPNB1AK53 854 aa6.05□□□□□ -1.44
HERPUD1-217ENST00000569429 G3V3Y1 287 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms