RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ACSBG2Q5FVE4 666 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 LRRC56Q8IYG6 542 aaPredicted RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 RPRMLQ8N4K4 120 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 KIF2BQ8N4N8 673 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 ZFP62Q8NB50 900 aaPredicted RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 FBXO15Q8NCQ5 510 aaPredicted RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 PPFIBP2Q8ND30 876 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 TSLPQ969D9 159 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 TM4SF19Q96DZ7 209 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 ALPK1Q96QP1 1244 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 POLDIP3Q9BY77 421 aaKnown RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 FAM129AQ9BZQ8 928 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 CHRAC1Q9NRG0 131 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 TREX1Q9NSU2 369 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 ZNF358Q9NW07 568 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 L3MBTL1Q9Y468 752 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 SLC22A7Q9Y694 548 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 PEX1O43933 1283 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 RDH16O75452 317 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 CDC123O75794 336 aaPredicted RBP11.67□□□□□ -0.54
SNX29-207ENST00000568949 ESR1P03372 595 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 CHRM3P20309 590 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 DNASE1P24855 282 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 EMC4Q5J8M3 183 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 RNF187Q5TA31 235 aaPredicted RBP11.67□□□□□ -0.54
SNX29-207ENST00000568949 THEMIS2Q5TEJ8 643 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 PAOXQ6QHF9 649 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 BIVMQ86UB2 503 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 PDSS2Q86YH6 399 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 HOMEZQ8IX15 550 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 LPGAT1Q92604 370 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 MBD6Q96DN6 1003 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 PEX11GQ96HA9 241 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 TCF12Q99081 682 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 MACROD1Q9BQ69 325 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 ABCF3Q9NUQ8 709 aa11.67□□□□□ -0.54
SNX29-207ENST00000568949 PFDN6O15212 129 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 PROM1O43490 865 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 FHP07954 510 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 RFC3P40938 356 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 DLX5P56178 289 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 ADAM8P78325 824 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 LTBQ06643 244 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 KCNJ11Q14654 390 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 RPS6KA1Q15418 735 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 TYSND1Q2T9J0 566 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 MRNIPQ6NTE8 343 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 CAMKMTQ7Z624 323 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 SDCCAG8Q86SQ7 713 aaPredicted RBP11.66□□□□□ -0.54
SNX29-207ENST00000568949 ASPGQ86U10 573 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 OTUD6BQ8N6M0 293 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 KCT2Q8NC54 265 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 OR52N2Q8NGI0 321 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 OR5M3Q8NGP4 307 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 ZCCHC10Q8TBK6 192 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 TBC1D20Q96BZ9 403 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 FAM136AQ96C01 138 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 RMND5BQ96G75 393 aaPredicted RBP11.66□□□□□ -0.54
SNX29-207ENST00000568949 RBCK1Q9BYM8 510 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 SLC6A16Q9GZN6 736 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 LIME1Q9H400 295 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 NAALAD2Q9Y3Q0 740 aa11.66□□□□□ -0.54
SNX29-207ENST00000568949 FEZF1A0PJY2 475 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 SAGE2PA6NJ88 616 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 BTNL10A8MVZ5 291 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 PDE9AO76083 593 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 SYF2O95926 243 aaKnown RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 APRTP07741 180 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 JAK1P23458 1154 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 PEX19P40855 299 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 SKIV2L2P42285 1042 aaKnown RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 ZFP36L2P47974 494 aaKnown RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 NAP1L1P55209 391 aaKnown RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 TBX2Q13207 712 aaPredicted RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 HERC3Q15034 1050 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 TTLL9Q3SXZ7 439 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 GXYLT1Q4G148 440 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 NIPAL1Q6NVV3 410 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 ARSKQ6UWY0 536 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 KIAA0408Q6ZU52 694 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 AFAP1L2Q8N4X5 818 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 SLC13A3Q8WWT9 602 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 ASB11Q8WXH4 323 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 CCDC138Q96M89 665 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 DEFB126Q9BYW3 111 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 IL22Q9GZX6 179 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 PCBD2Q9H0N5 130 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 CLEC4MQ9H2X3 399 aaPredicted RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 RAB6BQ9NRW1 208 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 RASSF1Q9NS23 344 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 KLHL42Q9P2K6 505 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 GALPQ9UBC7 116 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 PLEKHA6Q9Y2H5 1048 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 DUSP10Q9Y6W6 482 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 JMJD1CQ15652 2540 aa11.65□□□□□ -0.54
SNX29-207ENST00000568949 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.54
SNX29-207ENST00000568949 OR14I1A6ND48 311 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms