RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 GNLYP22749 145 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 AHRP35869 848 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 MAGEA4P43358 317 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 XCR1P46094 333 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 AP2B1P63010 937 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 MAT1AQ00266 395 aaKnown RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SRSF1Q07955 248 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF460Q14592 562 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 USP10Q14694 798 aaKnown RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 HERC3Q15034 1050 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 TRADDQ15628 312 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 TSNQ15631 228 aaKnown RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 PPP1R3AQ16821 1122 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 MINDY4Q4G0A6 757 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 PRR30Q53SZ7 412 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CRB2Q5IJ48 1285 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 MFSD4BQ5TF39 518 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 NIPAL1Q6NVV3 410 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 NXPE4Q6UWF7 544 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 LINC00696Q6ZRV3 163 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 RIPOR1Q6ZS17 1223 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 FRA10AC1Q70Z53 315 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 PRSS41Q7RTY9 318 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF572Q7Z3I7 529 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CPEB2Q7Z5Q1 589 aaKnown RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ADAMTSL2Q86TH1 951 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CUZD1Q86UP6 607 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CCDC25Q86WR0 208 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 PDSS2Q86YH6 399 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF740Q8NDX6 193 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 TRPV3Q8NET8 790 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ZCCHC10Q8TBK6 192 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 NT5CQ8TCD5 201 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 FBXO25Q8TCJ0 367 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 PPP4R1Q8TF05 950 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SLC5A11Q8WWX8 675 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF592Q92610 1267 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 MOCOSQ96EN8 888 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 IMMP1LQ96LU5 166 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 TSNARE1Q96NA8 513 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CPNE1Q99829 537 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 EGFL8Q99944 293 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 WDR77Q9BQA1 342 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 AIF1LQ9BQI0 150 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 TUBB6Q9BUF5 446 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SLC29A3Q9BZD2 475 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 VN1R1Q9GZP7 353 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 DERL2Q9GZP9 239 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 EPS8L2Q9H6S3 715 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CAB39LQ9H9S4 337 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 PELI2Q9HAT8 420 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 RIC8BQ9NVN3 520 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ASF1BQ9NVP2 202 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 HCN3Q9P1Z3 774 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 ZFP69BQ9UJL9 534 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SLC22A14Q9Y267 594 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 NAALAD2Q9Y3Q0 740 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 DNAJC13O75165 2243 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 COL12A1Q99715 3063 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 TCRBV9S1A1TA0A576 114 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 DYTNA2CJ06 578 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 OR2W5A6NFC9 320 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 URADA6NGE7 173 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 NDUFS4O43181 175 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 CHST10O43529 356 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 GALR3O60755 368 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 RDH16O75452 317 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 WISP3O95389 354 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 CBX6O95503 412 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 SERPINA6P08185 405 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 C1GALT1C1LP0DN25 315 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 ALOX12P18054 663 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 GNAZP19086 355 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 SPRP35270 261 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 GP5P40197 560 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 GDF5P43026 501 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 SCTRP47872 440 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 UQCRFS1P47985 274 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 AGTR2P50052 363 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 GPX6P59796 221 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 ATP6V0D1P61421 351 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 SKP1P63208 163 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 REEP5Q00765 189 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 EEF1A2Q05639 463 aaKnown RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 CKAP4Q07065 602 aaKnown RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 ACTN3Q08043 901 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 RGS1Q08116 209 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 CDC16Q13042 620 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 MFAP5Q13361 173 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF169Q14929 603 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 PCOLCEQ15113 449 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 RBBP5Q15291 538 aaKnown RBP6.53□□□□□ -1.36
SF3B3-209ENST00000567635 TLR1Q15399 786 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 NSDHLQ15738 373 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 DEFB134Q4QY38 66 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 CDKL4Q5MAI5 379 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 GRTP1Q5TC63 336 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 FHL5Q5TD97 284 aa6.53□□□□□ -1.36
SF3B3-209ENST00000567635 B3GNTL1Q67FW5 361 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms