RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 HNRNPKP61978 463 aaKnown RBP eCLIP1.49□□□□□ -2.17
SMG1-212ENST00000566328 NAAAQ02083 359 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 FAM106AQ4KMX7 169 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 TEX38Q6PEX7 206 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 Q7L0L9 218 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 NUP54Q7Z3B4 507 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 AACSQ86V21 672 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 CARM1Q86X55 608 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 RCOR2Q8IZ40 523 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 C17orf53Q8N3J3 647 aaPredicted RBP1.49□□□□□ -2.17
SMG1-212ENST00000566328 NME8Q8N427 588 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 PCYOX1LQ8NBM8 494 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 OR9Q2Q8NGE9 314 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 BTBD9Q96Q07 612 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 CDRT15Q96T59 188 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 MAPKAP1Q9BPZ7 522 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 SP140LQ9H930 580 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ZNF275Q9NSD4 429 aaPredicted RBP1.49□□□□□ -2.17
SMG1-212ENST00000566328 TBC1D13Q9NVG8 400 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 VNN3Q9NY84 501 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 CLEC4EQ9ULY5 219 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 WDR83OSQ9Y284 106 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 MRPL11Q9Y3B7 192 aaKnown RBP1.49□□□□□ -2.17
SMG1-212ENST00000566328 TIAM1Q13009 1591 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ABCC1P33527 1531 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ATP7AQ04656 1500 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 STRCP1A6NGW2 1772 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 CAMSAP2Q08AD1 1489 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 FYCO1Q9BQS8 1478 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 SHANK2Q9UPX8 1470 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 NPHP4O75161 1426 aaPredicted RBP1.49□□□□□ -2.17
SMG1-212ENST00000566328 MYOM3Q5VTT5 1437 aa1.49□□□□□ -2.17
SMG1-212ENST00000566328 ITSN2Q9NZM3 1697 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 PCNTO95613 3336 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 METP08581 1390 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 TMEM94Q12767 1356 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 ANKRD30AQ9BXX3 1397 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 DNMT1P26358 1616 aaKnown RBP1.48□□□□□ -2.17
SMG1-212ENST00000566328 KDM5CP41229 1560 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 UGGT1Q9NYU2 1555 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 MYO5BQ9ULV0 1848 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 LOC100509620A0A075B734 347 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 A0A1B0GVC2 190 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 FEZF1A0PJY2 475 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 NKX6-3A6NJ46 265 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 B4DLN1 442 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 TNFSF11O14788 317 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 INPP4BO15327 924 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 TNFSF12O43508 249 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 ECE2O60344 883 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 KBTBD11O94819 623 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 VENTXO95231 258 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 APBB3O95704 486 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 GIG44P09565 113 aaPredicted RBP1.48□□□□□ -2.17
SMG1-212ENST00000566328 SELEP16581 610 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 C4BPBP20851 252 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 SLC1A4P43007 532 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 SLC15A1P46059 708 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 MRPL12P52815 198 aaKnown RBP1.48□□□□□ -2.17
SMG1-212ENST00000566328 MAPK12P53778 367 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 VEZF1Q14119 521 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 MLF2Q15773 248 aaPredicted RBP1.48□□□□□ -2.17
SMG1-212ENST00000566328 BRINP3Q76B58 766 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 ZNF525Q8N782 197 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 KCNE4Q8WWG9 221 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 ATL1Q8WXF7 558 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 SPACA9Q96E40 222 aaPredicted RBP1.48□□□□□ -2.17
SMG1-212ENST00000566328 PPP1R16AQ96I34 528 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 FTOQ9C0B1 505 aaKnown RBP eCLIP1.48□□□□□ -2.17
SMG1-212ENST00000566328 Q9H8V8 135 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.48□□□□□ -2.17
SMG1-212ENST00000566328 RPS6KB2Q9UBS0 482 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 Q9UF83 564 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 ZMYM4Q5VZL5 1548 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 CCDC141Q6ZP82 1450 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 RTEL1-TNFRSF6BF6WH68 1400 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 PTPRTO14522 1441 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 DAPK1P53355 1430 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 NPATQ14207 1427 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 FGD6Q6ZV73 1430 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 PTPRUQ92729 1446 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 ANKRD50Q9ULJ7 1429 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 PREX2Q70Z35 1606 aa1.48□□□□□ -2.17
SMG1-212ENST00000566328 TMEM2Q9UHN6 1383 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PLEKHH1Q9ULM0 1364 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 MYH14Q7Z406 1995 aaKnown RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 AGLP35573 1532 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PRDM15P57071 1507 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 LRRC7Q96NW7 1537 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 CEP152O94986 1710 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 K7EQG2 157 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PAPSS1O43252 624 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 ZNF749O43361 778 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 LATO43561 262 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 SCO2O43819 266 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 SRPX2O60687 465 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 LYPD3O95274 346 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 SETQ01105 290 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 HSPB3Q12988 150 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms