RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 WWOXQ9NZC7 414 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PNMA8BQ9ULN7 279 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 UBQLN1Q9UMX0 589 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 UBIAD1Q9Y5Z9 338 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 C7orf66A4D0T2 115 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SPATA31C2B4DYI2 1134 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 DHFRP00374 187 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 F2P00734 622 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 C1RP00736 705 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 POLBP06746 335 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CEBPBP17676 345 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GGT1P19440 569 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SNU13P55769 128 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 PER3P56645 1201 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SNRNP35Q16560 246 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 SLC39A12Q504Y0 691 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZNF613Q6PF04 617 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TRMT11Q7Z4G4 463 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 CUZD1Q86UP6 607 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MCATQ8IVS2 390 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 GLB1L2Q8IW92 636 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 LRRC71Q8N4P6 559 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 DTWD1Q8N5C7 304 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MCPH1Q8NEM0 835 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ATOH1Q92858 354 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 CD180Q99467 661 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GPA33Q99795 319 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ITPAQ9BY32 194 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 EXO5Q9H790 373 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CATSPERBQ9H7T0 1116 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TRPM5Q9NZQ8 1165 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 LAMTOR3Q9UHA4 124 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 STON1Q9Y6Q2 735 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ST8SIA5O15466 376 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 HEXBP07686 556 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NFICP08651 508 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PKMP14618 531 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 ARSBP15848 533 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TAL1P17542 331 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 VAMP2P63027 116 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 EMX2Q04743 252 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RELQ04864 619 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 MXD4Q14582 209 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 ALG11Q2TAA5 492 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 Q3ZCU0 254 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 IQCCQ4KMZ1 466 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SLC30A6Q6NXT4 461 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SPESP1Q6UW49 350 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TMED4Q7Z7H5 227 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 DCP1BQ8IZD4 617 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 C1orf52Q8N6N3 182 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 HGDQ93099 445 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 LGALS12Q96DT0 336 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 C14orf79Q96F83 325 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NPAS1Q99742 590 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PIF1Q9H611 641 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SLC9A2Q9UBY0 812 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ERVK-19Q9WJR5 959 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZFP37Q9Y6Q3 630 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 ASB14A6NK59 587 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TMEM210A6NLX4 147 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 VEGFDO43915 354 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 AP2A1O95782 977 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SELLP14151 372 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PRKACGP22612 351 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CPN2P22792 545 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FSHRP23945 695 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PTBP1P26599 531 aaKnown RBP eCLIP2.83□□□□□ -1.964e-7■■■■■ 45.7
CHD9-218ENST00000566029 HOXA9P31269 272 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 IL2P60568 153 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CRADDP78560 199 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FLI1Q01543 452 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZNF33BQ06732 778 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 BAATQ14032 418 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZNF79Q15937 498 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MLIPQ5VWP3 458 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 EIF3MQ7L2H7 374 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 MFSD6LQ8IWD5 586 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 EMC1Q8N766 993 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SGK3Q96BR1 496 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PGAP3Q96FM1 320 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 PPIL3Q9H2H8 161 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 TMEM45AQ9NWC5 275 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ERVW-1Q9UQF0 538 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NPTNQ9Y639 398 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TRAV20A0A0B4J274 112 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 SLC22A23A1A5C7 686 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 LGALS8O00214 317 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 STX16O14662 325 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 AIREO43918 545 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 HBQ1P09105 142 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 TMIGD3P0DMS9 266 aaPredicted RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 RRASP10301 218 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 PRPS2P11908 318 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CD72P21854 359 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 KCNQ1P51787 676 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 NUBP1P53384 320 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ARHGEF7Q14155 803 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 FAM219BQ5XKK7 198 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CAPN13Q6MZZ7 669 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms