RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CLCN2P51788 898 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 PKNOX1P55347 436 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 ERVPABLB-1P60509 514 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 RPS15AP62244 130 aaKnown RBP12.06□□□□□ -0.48
SF3B3-206ENST00000565990 REEP5Q00765 189 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 SLC34A1Q06495 639 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 LCP2Q13094 533 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 TRAF3Q13114 568 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 CHI3L2Q15782 390 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 GGTA1PQ4G0N0 100 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 CES4AQ5XG92 561 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 GRHL2Q6ISB3 625 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 TMIGD1Q6UXZ0 262 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 ATG14Q6ZNE5 492 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 MILR1Q7Z6M3 343 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 KRT78Q8N1N4 520 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 CCNYL1Q8N7R7 359 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 ZNF740Q8NDX6 193 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 PIWIL2Q8TC59 973 aaKnown RBP12.06□□□□□ -0.48
SF3B3-206ENST00000565990 TRPC4APQ8TEL6 797 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 PPP4R1Q8TF05 950 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 DNAJC9Q8WXX5 260 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 THOC1Q96FV9 657 aaKnown RBP12.06□□□□□ -0.48
SF3B3-206ENST00000565990 MAGEB10Q96LZ2 347 aaPredicted RBP12.06□□□□□ -0.48
SF3B3-206ENST00000565990 SLC46A1Q96NT5 459 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 TAAR9Q96RI9 348 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 ZNF382Q96SR6 550 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 SPRY4Q9C004 299 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 DRC3Q9H069 523 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 SPNS1Q9H2V7 528 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 RHBGQ9H310 441 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 ACSS2Q9NR19 701 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 FGF21Q9NSA1 209 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 SERTAD3Q9UJW9 196 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 LOXL2Q9Y4K0 774 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 PCDHGA3Q9Y5H0 932 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 AP1M2Q9Y6Q5 423 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 WDFY3Q8IZQ1 3526 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 LOC105369274A0A096LPK9 316 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 LOC102723532A0A0G2JNH3 316 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 A0A0J9YVX5 310 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 FEZF1A0PJY2 475 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 FITM1A5D6W6 292 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 TMEM114B3SHH9 223 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 H0YGG7 62 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 PLD2O14939 933 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 NVLO15381 856 aaKnown RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 HYAL3O43820 417 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 PSMG1O95456 288 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ESRRBO95718 433 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ADRB1P08588 477 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 FGF4P08620 206 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 GSTM2P28161 218 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ADSLP30566 484 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 PGM1P36871 562 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 BCL6P41182 706 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 MLLT3P42568 568 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 PTDSS1P48651 473 aaKnown RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 EMP3P54852 163 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ARF3P61204 181 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 MEF2AQ02078 507 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 RTP5Q14D33 572 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 GPR19Q15760 415 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 HIST2H2ACQ16777 129 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-206ENST00000565990 PAGE2BQ5JRK9 111 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 TCTE1Q5JU00 501 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 CFAP157Q5JU67 520 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 METTL21CQ5VZV1 264 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 HIST2H2AA3Q6FI13 130 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 FRMPD2BQ6IN97 320 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 VN1R4Q7Z5H5 301 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 TMPRSS11BQ86T26 416 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 MARCH9Q86YJ5 346 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 HOMEZQ8IX15 550 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 OR4N4Q8N0Y3 316 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ARHGEF39Q8N4T4 335 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ANKRD53Q8N9V6 530 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 OR4F6Q8NGB9 312 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 CREB3L4Q8TEY5 395 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 JADE3Q92613 823 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 UBE2E3Q969T4 207 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 OR6C1Q96RD1 312 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ZPBPQ9BS86 351 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 DDA1Q9BW61 102 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 CCDC106Q9BWC9 280 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 VCXQ9H320 206 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 ACTR8Q9H981 624 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 POLR1BQ9H9Y6 1135 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 SOHLH2Q9NX45 425 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 SLC39A1Q9NY26 324 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 TRPS1Q9UHF7 1281 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 SATB2Q9UPW6 733 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 RNF11Q9Y3C5 154 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 NEUROG3Q9Y4Z2 214 aa12.05□□□□□ -0.48
SF3B3-206ENST00000565990 A6NHS1 94 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 TXNDC9O14530 226 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 POLR1CO15160 346 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 OR1F1O43749 312 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms