RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 ZNF33BQ06732 778 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 FRG1Q14331 258 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ZNF460Q14592 562 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 INAQ16352 499 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PPP1R3AQ16821 1122 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 BTBD16Q32M84 506 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ABHD17BQ5VST6 288 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PLAG1Q6DJT9 500 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ZC3HC1Q86WB0 502 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 FBXO36Q8NEA4 188 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SLC5A11Q8WWX8 675 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PDLIM5Q96HC4 596 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 TSNARE1Q96NA8 513 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 LANCL2Q9NS86 450 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ZFATQ9P243 1243 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SAR1BQ9Y6B6 198 aa16.43■□□□□ 0.22
MAP1LC3B-207ENST00000565788 UNC79Q9P2D8 2635 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 FAM95CA0A1B0GW59 222 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 OR5H15A6NDH6 313 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 CDC7O00311 574 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 LRRTM2O43300 516 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 DNAJB6O75190 326 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 B3GALT4O96024 378 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SERPIND1P05546 499 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 RHAGQ02094 409 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 MGAT5Q09328 741 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PDIA2Q13087 525 aaKnown RBP16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PWP1Q13610 501 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 CSHL1Q14406 222 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 HERC3Q15034 1050 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 FCRLBQ6BAA4 426 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ZNF787Q6DD87 383 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 STRA8Q7Z7C7 330 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PLPP5Q8NEB5 264 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 NR4A3Q92570 626 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 TSLPQ969D9 159 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 MOCS1Q9NZB8 636 aa16.42■□□□□ 0.22
MAP1LC3B-207ENST00000565788 CTAGE15A4D2H0 777 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 NPEPPSL1A6NEC2 478 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 A8MUI8 341 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 EFCAB8A8MWE9 144 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 E7ESA3 106 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 CCDC188H7C350 402 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 GALR3O60755 368 aaPredicted RBP16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ALOX12P18054 663 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 RPL21P46778 160 aaKnown RBP16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SCTRP47872 440 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 KCNK10P57789 538 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 TAS2R39P59534 338 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 OLR1P78380 273 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 REEP5Q00765 189 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SRSF11Q05519 484 aaKnown RBP16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ABRAXAS2Q15018 415 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 DEFB134Q4QY38 66 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SFT2D3Q587I9 215 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PAPD4Q6PIY7 484 aaKnown RBP16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 TMPRSS11BQ86T26 416 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 CTAGE6Q86UF2 777 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 THOC6Q86W42 341 aaKnown RBP16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 NKAPQ8N5F7 415 aaKnown RBP16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 NT5CQ8TCD5 201 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 OR1F2PQ96R84 312 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PELI2Q9HAT8 420 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 STMN3Q9NZ72 180 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 TEKT2Q9UIF3 430 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ZFP69BQ9UJL9 534 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PYCARDQ9ULZ3 195 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 DYRK1BQ9Y463 629 aa16.41■□□□□ 0.22
MAP1LC3B-207ENST00000565788 FANCGO15287 622 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PRAMEF2O60811 474 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 STSP08842 583 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ZNF888P0CJ79 500 aaPredicted RBP16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 IL10P22301 178 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 DCTP40126 519 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 PAFAH1B1P43034 410 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 MRPS25P82663 173 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 RGS1Q08116 209 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 NSDHLQ15738 373 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 H3F3CQ6NXT2 135 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 BEST3Q8N1M1 668 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ANKRD53Q8N9V6 530 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SUN3Q8TAQ9 357 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 UTP15Q8TED0 518 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ANKRD49Q8WVL7 239 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 ZNF354BQ96LW1 612 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 KRT12Q99456 494 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 NPAS2Q99743 824 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 KCNK13Q9HB14 408 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SMYD2Q9NRG4 433 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 SLC22A14Q9Y267 594 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 CACNA1DQ01668 2161 aa16.4■□□□□ 0.22
MAP1LC3B-207ENST00000565788 MAGEB17A8MXT2 336 aa16.39■□□□□ 0.21
MAP1LC3B-207ENST00000565788 CHST10O43529 356 aa16.39■□□□□ 0.21
MAP1LC3B-207ENST00000565788 MAN1A2O60476 641 aa16.39■□□□□ 0.21
MAP1LC3B-207ENST00000565788 PIAS1O75925 651 aa16.39■□□□□ 0.21
MAP1LC3B-207ENST00000565788 RASAL1O95294 804 aa16.39■□□□□ 0.21
MAP1LC3B-207ENST00000565788 FHP07954 510 aa16.39■□□□□ 0.21
MAP1LC3B-207ENST00000565788 MST1P26927 711 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms