RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 CCM2LQ9NUG4 571 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-208ENST00000565070 NLGN3Q9NZ94 848 aa12.17□□□□□ -0.46
NSMCE1-208ENST00000565070 VPS29Q9UBQ0 182 aa12.17□□□□□ -0.46
NSMCE1-208ENST00000565070 EGFL7Q9UHF1 273 aa12.17□□□□□ -0.46
NSMCE1-208ENST00000565070 DTNAQ9Y4J8 743 aa12.17□□□□□ -0.46
NSMCE1-208ENST00000565070 SNX13Q9Y5W8 968 aa12.17□□□□□ -0.46
NSMCE1-208ENST00000565070 PROB1E7EW31 1015 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 CELA2BP08218 269 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 NPPBP16860 134 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 TACR1P25103 407 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 PNLIPRP1P54315 467 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 TAP2Q03519 686 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 KLC1Q07866 573 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 BLMHQ13867 455 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 SUZ12Q15022 739 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 RPE65Q16518 533 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 CSRP2Q16527 193 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 GRAMD1BQ3KR37 738 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 NOXRED1Q6NXP6 359 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 SLC9B2Q86UD5 537 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 SPPL2CQ8IUH8 684 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 TRIM48Q8IWZ4 208 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 RBM12BQ8IXT5 1001 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 OR5K2Q8NHB8 316 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 SAP25Q8TEE9 199 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 CANT1Q8WVQ1 401 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 ZFPM2Q8WW38 1151 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 NEIL2Q969S2 332 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 PPM1MQ96MI6 270 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 CAAP1Q9H8G2 361 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 POT1Q9NUX5 634 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 IMP3Q9NV31 184 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 FAM86C1Q9NVL1 165 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 CNOT11Q9UKZ1 510 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 WDR37Q9Y2I8 494 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 PCDHGB2Q9Y5G2 931 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 PCDHGA11Q9Y5H2 935 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 CABIN1Q9Y6J0 2220 aa12.16□□□□□ -0.46
NSMCE1-208ENST00000565070 TRBV5-3A0A0A0MS03 114 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 LNP1A1A4G5 178 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 ZNF839A8K0R7 811 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 B4DGG1 531 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 HNRNPFP52597 415 aaKnown RBP12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 BNIP3Q12983 259 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 CLCA4Q14CN2 919 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 AASDHQ4L235 1098 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 C6orf132Q5T0Z8 1188 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 KANSL1Q7Z3B3 1105 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 SYTL1Q8IYJ3 562 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 RAB42Q8N4Z0 105 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 ICA1LQ8NDH6 482 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 CLHC1Q8NHS4 586 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 RAD51AP1Q96B01 352 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 APOLD1Q96LR9 279 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 OR52E6Q96RD3 313 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 NR1H4Q96RI1 486 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 INSM2Q96T92 566 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 EHD1Q9H4M9 534 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 UCKL1Q9NWZ5 548 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 VAPAQ9P0L0 249 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 MAN2B2Q9Y2E5 1009 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 PCDHB3Q9Y5E6 796 aa12.15□□□□□ -0.46
NSMCE1-208ENST00000565070 TCRBV5S2A0A599 114 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 DHRS12A0PJE2 317 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 PRMT3O60678 531 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 VIPP01282 170 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 GPIP06744 558 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 UQCRBP14927 111 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 C21orf58P58505 322 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 MTPNP58546 118 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 PHC1P78364 1004 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 SPEM2Q0P670 501 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 SELPLGQ14242 412 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 DEFB133Q30KQ1 61 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 LRIF1Q5T3J3 769 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 ATG9BQ674R7 924 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 TCEAL6Q6IPX3 200 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 ZCCHC8Q6NZY4 707 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 OGFOD3Q6PK18 319 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 MSANTD1Q6ZTZ1 278 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 IFNEQ86WN2 208 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 PROSER1Q86XN7 944 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 NAGSQ8N159 534 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 SLC25A45Q8N413 288 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 RNF175Q8N4F7 328 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 OR7G3Q8NG95 312 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 LRTOMTQ8WZ04 291 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 GATA6Q92908 595 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 TCEAL3Q969E4 200 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 FERD3LQ96RJ6 166 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 MTERF1Q99551 399 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 RAB11FIP5Q9BXF6 653 aa12.14□□□□□ -0.47
NSMCE1-208ENST00000565070 IL21RQ9HBE5 538 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms