RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 GPRIN2O60269 458 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 DPM1O60762 260 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 SOCS5O75159 536 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 GGCTO75223 188 aaKnown RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 LYPLA1O75608 230 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 RECQL4O94761 1208 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ATG12O94817 140 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 UBXN7O94888 489 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 AHSA1O95433 338 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 GSRP00390 522 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 OTCP00480 354 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 UQCRFS1P1P0C7P4 283 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PKMP14618 531 aaKnown RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ATF3P18847 181 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 IGFBP5P24593 272 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 FPR3P25089 353 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 HTR1EP28566 365 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 SHMT2P34897 504 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 RAD52P43351 418 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 LHX1P48742 406 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ACLYP53396 1101 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 SNRPD2P62316 118 aaKnown RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 RPS6P62753 249 aaKnown RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 NFKB2Q00653 900 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PTPN11Q06124 597 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CD47Q08722 323 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CDK5R2Q13319 367 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 GRB10Q13322 594 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 SMAD4Q13485 552 aaKnown RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 UBXN2BQ14CS0 331 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 LRRC41Q15345 812 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 NR6A1Q15406 480 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PROX2Q3B8N5 592 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 GLYR1Q49A26 553 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 TRIM61Q5EBN2 209 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 TFDP3Q5H9I0 405 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ARHGAP40Q5TG30 622 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PRPF38BQ5VTL8 546 aaKnown RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PRAMEF13Q5VWM6 474 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 TRIQKQ629K1 86 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 RAP1GAP2Q684P5 730 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ANKS6Q68DC2 871 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ZNF470Q6ECI4 717 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 VASNQ6EMK4 673 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CAPN13Q6MZZ7 669 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 KLHL24Q6TFL4 600 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CLEC2AQ6UVW9 174 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 C17orf107Q6ZR85 190 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CDHR3Q6ZTQ4 885 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ZNF367Q7RTV3 350 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 GALNT5Q7Z7M9 940 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 SERINC5Q86VE9 423 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 MEIOBQ8N635 442 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CLDN22Q8N7P3 220 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 C15orf54Q8N8G6 183 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ZNF511Q8NB15 262 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 POC1BQ8TC44 478 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ACOT11Q8WXI4 607 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PIGKQ92643 395 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 OSTF1Q92882 214 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ARMC5Q96C12 935 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 C14orf144Q96I85 54 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 NOL4LQ96MY1 436 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ZNF599Q96NL3 588 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 KLHL5Q96PQ7 755 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 NEDD4LQ96PU5 975 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 SIGLEC11Q96RL6 698 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 KLF6Q99612 283 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CGRRF1Q99675 332 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 C19orf43Q9BQ61 176 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 H2AFJQ9BTM1 129 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 C20orf27Q9GZN8 174 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 TNKS2Q9H2K2 1166 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PIGMQ9H3S5 423 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ZCCHC4Q9H5U6 513 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 KCNK12Q9HB15 430 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 ZFP64Q9NPA5 681 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 TMEM138Q9NPI0 162 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 MED17Q9NVC6 651 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PNPOQ9NVS9 261 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 NLE1Q9NVX2 485 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CALML5Q9NZT1 146 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 SEC14L3Q9UDX4 400 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 CMAHPQ9Y471 501 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 TMEM184BQ9Y519 407 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-204ENST00000564970 PCDHA10Q9Y5I2 948 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 NPFFR2Q9Y5X5 522 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 NPTNQ9Y639 398 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 V9GYH0 126 aa6.09□□□□□ -1.43
PTPN9-204ENST00000564970 TOPAZ1Q8N9V7 1692 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 A0A0G2JLW4 131 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 GLTPD2A6NH11 291 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 ERI2A8K979 691 aaKnown RBP6.08□□□□□ -1.44
PTPN9-204ENST00000564970 C5orf58C9J3I9 102 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 INMT-MINDY4F8WBC2 141 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 M0QYV0 167 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 TNFRSF10BO14763 440 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 BCKDKO14874 412 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 DSCR3O14972 297 aa6.08□□□□□ -1.44
PTPN9-204ENST00000564970 HSPA12AO43301 675 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms