RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FIGLAQ6QHK4 219 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 Q6ZSR9 355 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 FAM92BQ6ZTR7 304 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 LARP4Q71RC2 724 aaKnown RBP eCLIP10.61□□□□□ -0.71
SF3B3-205ENST00000564899 RNF175Q8N4F7 328 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 ANKRD53Q8N9V6 530 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 TTLQ8NG68 377 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 HUS1BQ8NHY5 278 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 NCSTNQ92542 709 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 ZDHHC12Q96GR4 267 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 PPP3R2Q96LZ3 170 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 TGM7Q96PF1 710 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 RAB33BQ9H082 229 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 KLHL25Q9H0H3 589 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 RHBGQ9H310 441 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 SEMA6CQ9H3T2 930 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 BRF2Q9HAW0 419 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 DMRT3Q9NQL9 472 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 EPHA6Q9UF33 1036 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 GIMAP2Q9UG22 337 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 ADGRE2Q9UHX3 823 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 TSC22D4Q9Y3Q8 395 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 CCL27Q9Y4X3 112 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 KLK4Q9Y5K2 254 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 COL6A6A6NMZ7 2263 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 COL5A1P20908 1838 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-205ENST00000564899 TLCD2A6NGC4 264 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 ANKDD1BA6NHY2 528 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 MAGEB17A8MXT2 336 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 FOXE1O00358 373 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 LSM1O15116 133 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 LCMT2O60294 686 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CCDC22O60826 627 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 RSL1D1O76021 490 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 PRR35P0CG20 571 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CKMT1AP12532 417 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 EZRP15311 586 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 NCF2P19878 526 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 GSTM2P28161 218 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CD1CP29017 333 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CSF2RBP32927 897 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 RPS15AP62244 130 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 RPL38P63173 70 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 GALNTL6Q49A17 601 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 SPDYAQ5MJ70 313 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 METTL21CQ5VZV1 264 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 TMEM198Q66K66 360 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 FCRL6Q6DN72 434 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 VN1R5Q7Z5H4 357 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 MTDHQ86UE4 582 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 PLXDC1Q8IUK5 500 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 C19orf47Q8N9M1 422 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 FNDC5Q8NAU1 212 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 MFSD9Q8NBP5 474 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 IFI44Q8TCB0 444 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 ZUFSPQ96AP4 578 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CNDP2Q96KP4 475 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CATSPER2Q96P56 530 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 TRAPPC9Q96Q05 1148 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CD180Q99467 661 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 MAP3K3Q99759 626 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 CCDC3Q9BQI4 270 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 SARGQ9BW04 601 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 SEMA4CQ9C0C4 833 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 NMUR2Q9GZQ4 415 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 LRTM1Q9HBL6 345 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 C1GALT1Q9NS00 363 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 G3BP2Q9UN86 482 aaKnown RBP10.6□□□□□ -0.71
SF3B3-205ENST00000564899 SLC12A4Q9UP95 1085 aa10.6□□□□□ -0.71
SF3B3-205ENST00000564899 A0A0J9YVX5 310 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 NPIPB8E9PQR5 432 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 FCHO1O14526 889 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 UBDO15205 165 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 SH3BGRLO75368 114 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 CLEC3AO75596 197 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 RASSF9O75901 435 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ETHE1O95571 254 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 LDOC1O95751 146 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-205ENST00000564899 SERPIND1P05546 499 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 SERPINA6P08185 405 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ST6GAL1P15907 406 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 PRPH2P23942 346 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 AHRP35869 848 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ERVK-8P63133 956 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 AP5B1Q2VPB7 878 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 C6orf136Q5SQH8 315 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 OGFOD2Q6N063 350 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 USP53Q70EK8 1073 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 SPATA19Q7Z5L4 167 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ZNF605Q86T29 641 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ZFAND4Q86XD8 727 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 GALNT15Q8N3T1 639 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ERP27Q96DN0 273 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 CMTM7Q96FZ5 175 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 MARK4Q96L34 752 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 LRRC37BQ96QE4 947 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 SERPINI1Q99574 410 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 CDC6Q99741 560 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ZFYVE21Q9BQ24 234 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 MS4A8Q9BY19 250 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms