RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 C2orf74A8MZ97 194 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 CAPN5O15484 640 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 TNFSF14O43557 240 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 SORBS2O94875 1100 aaKnown RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 ANPEPP15144 967 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 PEBP1P30086 187 aaKnown RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 HNRNPKP61978 463 aaKnown RBP eCLIP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 MS4A2Q01362 244 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 LIPEQ05469 1076 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 SIM2Q14190 667 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 GPR18Q14330 331 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 UGT8Q16880 541 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 SLC5A12Q1EHB4 618 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 DUOXA1Q1HG43 343 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 RUNDC3AQ59EK9 446 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 IRAK1BP1Q5VVH5 260 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 KLHL35Q6PF15 583 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 NUDT13Q86X67 352 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 PROSER1Q86XN7 944 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 PTRH1Q86Y79 214 aaKnown RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 AQP12AQ8IXF9 295 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 ANKRD53Q8N9V6 530 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 MFSD9Q8NBP5 474 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 FAM46DQ8NEK8 389 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 BHLHE22Q8NFJ8 381 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 C16orf78Q8WTQ4 265 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 ZDHHC1Q8WTX9 485 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 DUS3LQ96G46 650 aaKnown RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 SLC45A3Q96JT2 553 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 EGLN2Q96KS0 407 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 KCTD14Q9BQ13 255 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 ECSITQ9BQ95 431 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 DUSP26Q9BV47 211 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 LRRC61Q9BV99 259 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 TCEAL2Q9H3H9 227 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 UCK1Q9HA47 277 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 SLC6A20Q9NP91 592 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 SPHK1Q9NYA1 384 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 ACTR3BQ9P1U1 418 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 NKX1-2Q9UD57 310 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-210ENST00000564587 MUTYHQ9UIF7 546 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 BTNL2Q9UIR0 455 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 PACSIN3Q9UKS6 424 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 KLK4Q9Y5K2 254 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 TRBV23OR9-2A0A075B6M9 112 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 IGKV1-8A0A0C4DH67 115 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 PRAMEF33A0A0G2JMD5 474 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 BTN3A3O00478 584 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 RFXANKO14593 260 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 VILLO15195 856 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 NDUFS4O43181 175 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 ZW10O43264 779 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 AKAP10O43572 662 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 TBX19O60806 448 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 GUCY1B2O75343 617 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 GMNNO75496 209 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 LRATO95237 230 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 ANP32DO95626 131 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 WNT1P04628 370 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 DCNP07585 359 aaKnown RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 TCN1P20061 433 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 PPIBP23284 216 aaKnown RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 TSFMP43897 325 aaKnown RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 GSK3BP49841 420 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 C21orf59P57076 290 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 NXPH1P58417 271 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 SIGLEC14Q08ET2 396 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 TEAD4Q15561 434 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 ZIC1Q15915 447 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 HKDC1Q2TB90 917 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 CCNYL2Q5T2Q4 361 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 FAM71E1Q6IPT2 247 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 LCN8Q6JVE9 175 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 TMEM26Q6ZUK4 368 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 SPATA24Q86W54 205 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 PAQR7Q86WK9 346 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 NAGSQ8N159 534 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 CDC26Q8NHZ8 85 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 C1orf216Q8TAB5 229 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 SLC37A2Q8TED4 501 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 CREB3L4Q8TEY5 395 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 ZNF764Q96H86 408 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 RSRC1Q96IZ7 334 aaKnown RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 PPM1MQ96MI6 270 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 EFHD1Q9BUP0 239 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 REXO4Q9GZR2 422 aaKnown RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 PAIP1Q9H074 479 aaKnown RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 MIR1-1HGQ9H1L0 117 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 VCX3BQ9H321 246 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 ACTR10Q9NZ32 417 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 DOLKQ9UPQ8 538 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 INVSQ9Y283 1065 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 SNX13Q9Y5W8 968 aa14.88□□□□□ -0.03
COMMD4-210ENST00000564587 ARHGEF17Q96PE2 2063 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-210ENST00000564587 TRBV5-3A0A0A0MS03 114 aa14.87□□□□□ -0.03
COMMD4-210ENST00000564587 FEZF1A0PJY2 475 aa14.87□□□□□ -0.03
COMMD4-210ENST00000564587 GABRR3A8MPY1 467 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms