RNA–Protein interactions for RNA: ENST00000564547.1

TRAPPC2L-208, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2

Gene TRAPPC2L, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-208ENST00000564547 ZNF669Q96BR6 464 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 MAGED4Q96JG8 741 aa13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 TCF12Q99081 682 aa13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 UTP23Q9BRU9 249 aaKnown RBP13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PLAC1Q9HBJ0 212 aa13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 TMEM184CQ9NVA4 438 aa13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 ZNF223Q9UK11 482 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 ZNF407Q9C0G0 2248 aa13.22□□□□□ -0.29
TRAPPC2L-208ENST00000564547 E5RI56 91 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PRPF4O43172 522 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 CHST10O43529 356 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PRKNO60260 465 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 B4GALT2O60909 372 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PHF2O75151 1096 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 FGGP02679 453 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 MPC1LP0DKB6 136 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 MAOAP21397 527 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 EEF1DP29692 281 aaKnown RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PPP2R1BP30154 601 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 CDKN2DP55273 166 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 OC90Q02509 493 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 TFF3Q07654 80 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 HYAL2Q12891 473 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 NAE1Q13564 534 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PTK6Q13882 451 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 DHX34Q14147 1143 aaKnown RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 RPS6KA1Q15418 735 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 NSDHLQ15738 373 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 MAPKAPK3Q16644 382 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 MEP1AQ16819 746 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 CATSPEREQ5SY80 951 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 RBM20Q5T481 1227 aaKnown RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 DRICH1Q6PGQ1 229 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 MDGA2Q7Z553 956 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 CDH24Q86UP0 819 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 CEP97Q8IW35 865 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 SDCCAG3Q96C92 435 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 KLHL31Q9H511 634 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 LIN28AQ9H9Z2 209 aaKnown RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 NECTIN3Q9NQS3 549 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 LRFN1Q9P244 771 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 PCDHGB6Q9Y5F9 930 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 ANKHD1Q8IWZ3 2542 aaKnown RBP13.21□□□□□ -0.29
TRAPPC2L-208ENST00000564547 A0A0G2JMM0 328 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 A0A1B0GTH9 108 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 MYOCOSA0A1B0GUC4 107 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 A0A1W2PPB8 328 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 A0A1W2PRS3 328 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 KIR3DP1A8MWS1 328 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 H3BMM5 538 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 NDC80O14777 642 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 NME2P1O60361 137 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 TSPAN12O95859 305 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 IGFBP2P18065 325 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 AGAP20933 346 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 NME2P22392 152 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 MAGEA6P43360 314 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 ITGA8P53708 1063 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 OR4D2P58180 307 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 RBPJQ06330 500 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 DEFB134Q4QY38 66 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 CMPK2Q5EBM0 449 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 CAPN13Q6MZZ7 669 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 AGTRAPQ6RW13 159 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 ASPGQ86U10 573 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 CCDC71Q8IV32 467 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 MFSD9Q8NBP5 474 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 TMEM52Q8NDY8 209 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 SIGLEC10Q96LC7 697 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 SPOCK3Q9BQ16 436 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 SGPP1Q9BX95 441 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 FAM114A2Q9NRY5 505 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 DEPPQ9NTK1 212 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 DNAJC13O75165 2243 aa13.2□□□□□ -0.3
TRAPPC2L-208ENST00000564547 CTAGE9A4FU28 777 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 MAGEB17A8MXT2 336 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 HS6ST1O60243 411 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 GALR3O60755 368 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 SLC25A12O75746 678 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 PDE9AO76083 593 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 CCNDBP1O95273 360 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 ZNF888P0CJ79 500 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 SSTR2P30874 369 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 HNF4AP41235 474 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 HNRNPFP52597 415 aaKnown RBP13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 SMSP52788 366 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 MLF1P58340 268 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 GPR85P60893 370 aa13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
TRAPPC2L-208ENST00000564547 ACTN3Q08043 901 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms