RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KMT5CQ86Y97 462 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 PLD3Q8IV08 490 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPG7-209ENST00000564047 FITM2Q8N6M3 262 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ANKRD53Q8N9V6 530 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 MTFMTQ96DP5 389 aaKnown RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 OR2A5Q96R48 311 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 GFM1Q96RP9 751 aaKnown RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 TMEM120AQ9BXJ8 343 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 KLHL25Q9H0H3 589 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 DMRT3Q9NQL9 472 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 RIC8BQ9NVN3 520 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 TMEM9Q9P0T7 183 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ZFP69BQ9UJL9 534 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ATXN7L1Q9ULK2 861 aaPredicted RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 CCL27Q9Y4X3 112 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 AP1M2Q9Y6Q5 423 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ACACAQ13085 2346 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 CABIN1Q9Y6J0 2220 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 IGHV5-51A0A0C4DH38 117 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 MAGEB17A8MXT2 336 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 NPIPB8E9PQR5 432 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 MAP3K7O43318 606 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 DIAPH2O60879 1101 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 CTSVO60911 334 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 CLEC3AO75596 197 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ANKRD34CP0C6C1 535 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 E2F1Q01094 437 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 DDX39BQ13838 428 aaKnown RBP12.34□□□□□ -0.43
SPG7-209ENST00000564047 SLC9B1Q4ZJI4 515 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ZC3H12BQ5HYM0 836 aaKnown RBP12.34□□□□□ -0.43
SPG7-209ENST00000564047 FBXW10Q5XX13 1052 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ADNP2Q6IQ32 1131 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ZNF574Q6ZN55 896 aaPredicted RBP12.34□□□□□ -0.43
SPG7-209ENST00000564047 Q6ZSR9 355 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ACAD11Q709F0 780 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 TMPRSS9Q7Z410 1059 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 VN1R5Q7Z5H4 357 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 GLRX5Q86SX6 157 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 DNAJC22Q8N4W6 341 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 TRPV3Q8NET8 790 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ACTRT2Q8TDY3 377 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 KLHL6Q8WZ60 621 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 SLC41A2Q96JW4 573 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 PPP1R36Q96LQ0 422 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 C3orf30Q96M34 536 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 HBEGFQ99075 208 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 MTERF1Q99551 399 aaKnown RBP12.34□□□□□ -0.43
SPG7-209ENST00000564047 EBF4Q9BQW3 602 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 CCDC28BQ9BUN5 200 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ACPTQ9BZG2 426 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ZNF768Q9H5H4 540 aaKnown RBP12.34□□□□□ -0.43
SPG7-209ENST00000564047 WDR55Q9H6Y2 383 aaPredicted RBP12.34□□□□□ -0.43
SPG7-209ENST00000564047 SYNDIG1Q9H7V2 258 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 FAM60AQ9NP50 221 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 PDE7BQ9NP56 450 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 NMRK1Q9NWW6 199 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 KLHL3Q9UH77 587 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 PTGDR2Q9Y5Y4 395 aa12.34□□□□□ -0.43
SPG7-209ENST00000564047 ARID1BQ8NFD5 2236 aaPredicted RBP12.34□□□□□ -0.43
SPG7-209ENST00000564047 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 D6RAR5 112 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 CASC3O15234 703 aaKnown RBP12.33□□□□□ -0.44
SPG7-209ENST00000564047 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
SPG7-209ENST00000564047 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 RFPL3O75679 317 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 RSL1D1O76021 490 aaKnown RBP12.33□□□□□ -0.44
SPG7-209ENST00000564047 PRR35P0CG20 571 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 THRAP10827 490 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
SPG7-209ENST00000564047 PRPH2P23942 346 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 PTX3P26022 381 aaPredicted RBP12.33□□□□□ -0.44
SPG7-209ENST00000564047 EPHA3P29320 983 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 HNRNPH1P31943 449 aaKnown RBP12.33□□□□□ -0.44
SPG7-209ENST00000564047 ARL4DP49703 201 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 RPS13P62277 151 aaKnown RBP12.33□□□□□ -0.44
SPG7-209ENST00000564047 HSD11B2P80365 405 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 CYP4F3Q08477 520 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.447e-7■□□□□ 8.2
SPG7-209ENST00000564047 RIPK1Q13546 671 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPG7-209ENST00000564047 PWP1Q13610 501 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 CUL3Q13618 768 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 SPIDRQ14159 915 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 CYB5D1Q6P9G0 228 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 LARP4Q71RC2 724 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPG7-209ENST00000564047 ASRGL1Q7L266 308 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 ASPGQ86U10 573 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 OR2T11Q8NH01 316 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 CEP70Q8NHQ1 597 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 CREB3L4Q8TEY5 395 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 TUBGCP3Q96CW5 907 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 TM4SF19Q96DZ7 209 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 CMTM7Q96FZ5 175 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 METTL2AQ96IZ6 378 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms