RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SAMD15Q9P1V8 674 aa17.55■□□□□ 0.4
NME3-204ENST00000563498 NAALAD2Q9Y3Q0 740 aa17.55■□□□□ 0.4
NME3-204ENST00000563498 SETD2Q9BYW2 2564 aaPredicted RBP17.55■□□□□ 0.4
NME3-204ENST00000563498 PRRG2O14669 202 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 ADAM10O14672 748 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 SLC25A12O75746 678 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 KRT38O76015 456 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 GRK3P35626 688 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 COILP38432 576 aaPredicted RBP17.54■□□□□ 0.4
NME3-204ENST00000563498 TLE4Q04727 773 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 THOC5Q13769 683 aaKnown RBP17.54■□□□□ 0.4
NME3-204ENST00000563498 DHX34Q14147 1143 aaKnown RBP17.54■□□□□ 0.4
NME3-204ENST00000563498 HERC3Q15034 1050 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 CAPN13Q6MZZ7 669 aaPredicted RBP17.54■□□□□ 0.4
NME3-204ENST00000563498 LRRC8EQ6NSJ5 796 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 CASC4Q6P4E1 433 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 PIWIL4Q7Z3Z4 852 aaKnown RBP17.54■□□□□ 0.4
NME3-204ENST00000563498 SLC26A11Q86WA9 606 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 C17orf64Q86WR6 236 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 RPS19BP1Q86WX3 136 aaKnown RBP17.54■□□□□ 0.4
NME3-204ENST00000563498 DENND6AQ8IWF6 608 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 LMNTD2Q8IXW0 634 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 CD200R1Q8TD46 325 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 CA5BP1Q8WTZ4 195 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 PEX11GQ96HA9 241 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 GPR21Q99679 349 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 ASB1Q9Y576 335 aa17.54■□□□□ 0.4
NME3-204ENST00000563498 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.53■□□□□ 0.4
NME3-204ENST00000563498 FEZF1A0PJY2 475 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 NDC80O14777 642 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 CDC123O75794 336 aaPredicted RBP17.53■□□□□ 0.4
NME3-204ENST00000563498 CCND1P24385 295 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 KCNJ1P48048 391 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 CYB561P49447 251 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 ST13P50502 369 aaKnown RBP17.53■□□□□ 0.4
NME3-204ENST00000563498 OR4D2P58180 307 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 CTBP1Q13363 440 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 MAPKAPK3Q16644 382 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 RNFT1Q5M7Z0 435 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 NIPAL1Q6NVV3 410 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 NCCRP1Q6ZVX7 275 aaPredicted RBP17.53■□□□□ 0.4
NME3-204ENST00000563498 CAND1Q86VP6 1230 aaKnown RBP17.53■□□□□ 0.4
NME3-204ENST00000563498 CPNE9Q8IYJ1 553 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 AFAP1L2Q8N4X5 818 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 POGLUT1Q8NBL1 392 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 MFSD9Q8NBP5 474 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 TSLPQ969D9 159 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
NME3-204ENST00000563498 SARGQ9BW04 601 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 CDCP1Q9H5V8 836 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 FBXO6Q9NRD1 293 aaPredicted RBP17.53■□□□□ 0.4
NME3-204ENST00000563498 HOMER3Q9NSC5 361 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 COQ3Q9NZJ6 369 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 GUCA1BQ9UMX6 200 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 SH2B3Q9UQQ2 575 aa17.53■□□□□ 0.4
NME3-204ENST00000563498 ZCWPW2A0A1B0GU75 182 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 FANCGO15287 622 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 LCMT2O60294 686 aaKnown RBP17.52■□□□□ 0.4
NME3-204ENST00000563498 FGGP02679 453 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 FHP07954 510 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 MLNP12872 115 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 JAK1P23458 1154 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 TPP2P29144 1249 aaPredicted RBP17.52■□□□□ 0.4
NME3-204ENST00000563498 TRHRP34981 398 aaPredicted RBP17.52■□□□□ 0.4
NME3-204ENST00000563498 SKP1P63208 163 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 HSF1Q00613 529 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 ZNF468Q5VIY5 522 aaPredicted RBP17.52■□□□□ 0.4
NME3-204ENST00000563498 AGTRAPQ6RW13 159 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 LCTLQ6UWM7 567 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 FGD2Q7Z6J4 655 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 TBC1D20Q96BZ9 403 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 SGPP1Q9BX95 441 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 RBCK1Q9BYM8 510 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 PPT2Q9UMR5 302 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 PDE10AQ9Y233 779 aa17.52■□□□□ 0.4
NME3-204ENST00000563498 SDR42E2A6NKP2 422 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 GALR3O60755 368 aaPredicted RBP17.51■□□□□ 0.39
NME3-204ENST00000563498 C8GP07360 202 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 F7P08709 466 aaPredicted RBP17.51■□□□□ 0.39
NME3-204ENST00000563498 SLC1A2P43004 574 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 MEF2AQ02078 507 aaPredicted RBP17.51■□□□□ 0.39
NME3-204ENST00000563498 SP140Q13342 867 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 PWP1Q13610 501 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 MEX3BQ6ZN04 569 aaKnown RBP17.51■□□□□ 0.39
NME3-204ENST00000563498 ZNF227Q86WZ6 799 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 SPNS2Q8IVW8 549 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 ARMC10Q8N2F6 343 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 CPSF7Q8N684 471 aaKnown RBP17.51■□□□□ 0.39
NME3-204ENST00000563498 ABHD11Q8NFV4 315 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 OR5T3Q8NGG3 340 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 CALML6Q8TD86 181 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 SDCCAG3Q96C92 435 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 PARVBQ9HBI1 364 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 SCN3AQ9NY46 2000 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 ADAMTS6Q9UKP5 1117 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 GTF3C1Q12789 2109 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 NF1P21359 2839 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 MED13LQ71F56 2210 aa17.51■□□□□ 0.39
NME3-204ENST00000563498 ZNF860A6NHJ4 632 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 SLC16A5O15375 505 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms