RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PIAS3Q9Y6X2 628 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 PRR19A6NJB7 356 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 OR52A4PA6NMU1 304 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 H7BY64 318 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 CST1P01037 141 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 ABCB1P08183 1280 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-203ENST00000563226 FURINP09958 794 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 NUDT7P0C024 238 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 ATP6V1B1P15313 513 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 C2orf80Q0P641 193 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 VMACQ2NL98 169 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 LRRC23Q53EV4 343 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-203ENST00000563226 FAM71E1Q6IPT2 247 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 KRT80Q6KB66 452 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 SATL1Q86VE3 508 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 SMRP1Q8NCR6 262 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 OR4A15Q8NGL6 344 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 CYGBQ8WWM9 190 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 PRAP1Q96NZ9 151 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 PHF12Q96QT6 1004 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 PELI2Q9HAT8 420 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 WASH6PQ9NQA3 447 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 SMPD3Q9NY59 655 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-203ENST00000563226 CA5BQ9Y2D0 317 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 TSC22D4Q9Y3Q8 395 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 PRUNE2Q8WUY3 3088 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 RTCAO00442 366 aaKnown RBP18.32■□□□□ 0.52
SMPD3-203ENST00000563226 TFAP2AP05549 437 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 CLDN2P57739 230 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 PHEXP78562 749 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 PPP1R8Q12972 351 aaKnown RBP18.32■□□□□ 0.52
SMPD3-203ENST00000563226 APOFQ13790 326 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 PDE7AQ13946 482 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 ANXA8L1Q5VT79 327 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 CPZQ66K79 652 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 ZNF852Q6ZMS4 543 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 SLC9B2Q86UD5 537 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 HS3ST5Q8IZT8 346 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 ZFP90Q8TF47 636 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 SIPA1Q96FS4 1042 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 CAMK1GQ96NX5 476 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 CHST8Q9H2A9 424 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 FGF22Q9HCT0 170 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 MYNNQ9NPC7 610 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 C8orf4Q9NR00 106 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 LMCD1Q9NZU5 365 aa18.32■□□□□ 0.52
SMPD3-203ENST00000563226 SNRNP200O75643 2136 aaKnown RBP18.31■□□□□ 0.52
SMPD3-203ENST00000563226 POM121BA6NF01 834 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 RNASET2O00584 256 aaKnown RBP18.31■□□□□ 0.52
SMPD3-203ENST00000563226 PLPP1O14494 284 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 IL3P08700 152 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 PTX3P26022 381 aaPredicted RBP18.31■□□□□ 0.52
SMPD3-203ENST00000563226 TPP2P29144 1249 aaPredicted RBP18.31■□□□□ 0.52
SMPD3-203ENST00000563226 HSD17B2P37059 387 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 HBA1P69905 142 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 CYBRD1Q53TN4 286 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 TMEM31Q5JXX7 168 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 METTL25Q8N6Q8 603 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 ABHD11Q8NFV4 315 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 CXorf40BQ96DE9 158 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 PYURFQ96I23 114 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 TRAPPC9Q96Q05 1148 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 F2RL3Q96RI0 385 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 AIF1LQ9BQI0 150 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 ZNF717Q9BY31 904 aaPredicted RBP18.31■□□□□ 0.52
SMPD3-203ENST00000563226 BHLHE41Q9C0J9 482 aaPredicted RBP18.31■□□□□ 0.52
SMPD3-203ENST00000563226 RHBGQ9H310 441 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 PNPLA3Q9NST1 481 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 DNAJB9Q9UBS3 223 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 MAPRE3Q9UPY8 281 aa18.31■□□□□ 0.52
SMPD3-203ENST00000563226 KLHL33A6NCF5 533 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 ZNF682O95780 498 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 C6orf47O95873 294 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 CLPTM1O96005 669 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 NTRK1P04629 796 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 C7P10643 843 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 MYF6P23409 242 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 ARSFP54793 590 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 REEP5Q00765 189 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 TCEA2Q15560 299 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 ANKRD34AQ69YU3 496 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 STK32CQ86UX6 486 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 PLD3Q8IV08 490 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 FAM20CQ8IXL6 584 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 OFCC1Q8IZS5 231 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 VPS37AQ8NEZ2 397 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 MRPS26Q9BYN8 205 aaKnown RBP18.3■□□□□ 0.52
SMPD3-203ENST00000563226 FAM192AQ9GZU8 254 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 ZNF576Q9H609 170 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 MAGIXQ9H6Y5 334 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 CAAP1Q9H8G2 361 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 PREBQ9HCU5 417 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 PRDM8Q9NQV8 689 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 FZD4Q9ULV1 537 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 DNAH14Q0VDD8 3507 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 IGKV1-8A0A0C4DH67 115 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 ANKDD1BA6NHY2 528 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 CCNDBP1O95273 360 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 CCR8P51685 355 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 CASP9P55211 416 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms