RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 IGHV4-61A0A0C4DH41 118 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CCDC162PA2VCL2 907 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 PRR23AA6NEV1 266 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 ANKDD1BA6NHY2 528 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 TMEM150CB9EJG8 249 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 PRPSAP2O60256 369 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 RAD51DO75771 328 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 NADKO95544 446 aaPredicted RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 PTBP3O95758 552 aaKnown RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CLPTM1O96005 669 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 IGHV4-59P01825 116 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 AMBPP02760 352 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 PRSS56P0CW18 603 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 B4GALT1P15291 398 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 FERP16591 822 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CA6P23280 308 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 AHCYP23526 432 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 GJB2P29033 226 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CEACAM8P31997 349 aaPredicted RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CSTF2P33240 577 aaKnown RBP eCLIP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CAMLGP49069 296 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 HSD17B7P56937 341 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 SRP54P61011 504 aaKnown RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 KLC1Q07866 573 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 LCP2Q13094 533 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 GPR17Q13304 367 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CDH18Q13634 790 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 RBM39Q14498 530 aaKnown RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 KARSQ15046 597 aaKnown RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 P2RY6Q15077 328 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 KRT31Q15323 416 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 TAF13Q15543 124 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 FUT11Q495W5 492 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF789Q5FWF6 425 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM53AQ6NSI3 398 aaPredicted RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 WDR88Q6ZMY6 472 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 IL17RELQ6ZVW7 336 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 ANKRD33Q7Z3H0 272 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 PRSS42Q7Z5A4 293 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 C5orf24Q7Z6I8 188 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF410Q86VK4 478 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 ERC1Q8IUD2 1116 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 OR4C15Q8NGM1 316 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM76AQ8TAV0 307 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 SLC26A7Q8TE54 656 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 PHLDA1Q8WV24 401 aaPredicted RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 CKAP2Q8WWK9 683 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 METTL21AQ8WXB1 218 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 TMEM190Q8WZ59 177 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 SNRNP40Q96DI7 357 aaKnown RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 DUX3Q96PT4 197 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 NEDD4LQ96PU5 975 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 F2RL3Q96RI0 385 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 PIGQQ9BRB3 760 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 ALKBH7Q9BT30 221 aaPredicted RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 SHARPINQ9H0F6 387 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 MTIF3Q9H2K0 278 aaKnown RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 DPEP2Q9H4A9 486 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 GPN1Q9HCN4 374 aaPredicted RBP2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 SIX2Q9NPC8 291 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 SLC52A3Q9NQ40 469 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 FGF21Q9NSA1 209 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 SPASTQ9UBP0 616 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 C2CD2Q9Y426 696 aa2.91□□□□□ -1.94
SHCBP1-202ENST00000563219 TRAV18A0A075B6X5 111 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 A0A087X0K7 114 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 RNF103-CHMP3A0A140T963 221 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 MAGEB16A2A368 324 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 C2orf81A6NN90 581 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 SNURFLB1AK76 121 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 RNF103O00237 685 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PSMD3O43242 534 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 TXNL1O43396 289 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 GAS8O95995 478 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 TGFAP01135 160 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 IFNB1P01574 187 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PATE4P0C8F1 98 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 CCDC192P0DO97 292 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 IGHV4-31P0DP07 118 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ETS1P14921 441 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 DESP17661 470 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 RPA1P27694 616 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ALDH4A1P30038 563 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 SRD5A2P31213 254 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 SFNP31947 248 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 HSPA1LP34931 641 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PITPNBP48739 271 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 EVCP57679 992 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PDE7AQ13946 482 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 OPCMLQ14982 345 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 CCDC6Q16204 474 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 GPR33Q49SQ1 333 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PDLIM3Q53GG5 364 aaPredicted RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 LDLRAP1Q5SW96 308 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 OR6B2Q6IFH4 312 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF770Q6IQ21 691 aaPredicted RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 MFSD7Q6UXD7 560 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 C1orf186Q6ZWK4 172 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ADAMTSL2Q86TH1 951 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 SIAH3Q8IW03 269 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms