RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 MLF2Q15773 248 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 PRRT3Q5FWE3 981 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PTCRAQ6ISU1 281 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 RBM44Q6ZP01 1051 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 NLRP8Q86W28 1048 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ANKRD53Q8N9V6 530 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 OR2L2Q8NH16 312 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 RPLP0P6Q8NHW5 317 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ZNF570Q96NI8 536 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 HBEGFQ99075 208 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 GAL3ST1Q99999 423 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 RC3H2Q9HBD1 1191 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 ACSS2Q9NR19 701 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PLCL2Q9UPR0 1127 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 A6NHS1 94 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ADAMDEC1O15204 470 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 NT5EP21589 574 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 INHBCP55103 352 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 RPS15AP62244 130 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 TBPL1P62380 186 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ITGADQ13349 1161 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 DUOXA1Q1HG43 343 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 FAM182AQ5T1J6 154 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 OTULINQ96BN8 352 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ASB9Q96DX5 294 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 SLC47A1Q96FL8 570 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CDK15Q96Q40 435 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 PELOQ9BRX2 385 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 UBE2ZQ9H832 354 aaPredicted RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 POLR1BQ9H9Y6 1135 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 AIG1Q9NVV5 245 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 USE1Q9NZ43 259 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 NFKBIL1Q9UBC1 381 aaPredicted RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 SEC14L3Q9UDX4 400 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 DUSP12Q9UNI6 340 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 PDE10AQ9Y233 779 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 SAMHD1Q9Y3Z3 626 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 TTC3P53804 2025 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 B8ZZF3 427 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CST1P01037 141 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 RPL10P27635 214 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 AOAHP28039 575 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 MLLT3P42568 568 aaPredicted RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 GDF5P43026 501 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CXCL12P48061 93 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 UGT2B15P54855 530 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CDC42P60953 191 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 C1DQ13901 141 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 KANK2Q63ZY3 851 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ZNF574Q6ZN55 896 aaPredicted RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 SYVN1Q86TM6 617 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 LRRC58Q96CX6 371 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 UBXN10Q96LJ8 280 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 BOCQ9BWV1 1114 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 EBPLQ9BY08 206 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 MRPS26Q9BYN8 205 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 FAIMQ9NVQ4 179 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 MYRFQ9Y2G1 1151 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 WASF2Q9Y6W5 498 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CASP8AP2Q9UKL3 1982 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CYP7B1O75881 506 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CDH1P12830 882 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 JUNDP17535 347 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ACTR3P61158 418 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 COTL1Q14019 142 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 GRHL2Q6ISB3 625 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 OGFOD2Q6N063 350 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 LCTLQ6UWM7 567 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 EIF3MQ7L2H7 374 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 CLEC14AQ86T13 490 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 HPS6Q86YV9 775 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 MICU2Q8IYU8 434 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 C8orf59Q8N0T1 100 aaPredicted RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 ACVR1CQ8NER5 493 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 OR4E2Q8NGC2 313 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 OR56A1Q8NGH5 318 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 RHBDF1Q96CC6 855 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 MTERF3Q96E29 417 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 Q96MT0 163 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 FNDC11Q9BVV2 318 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 SPATA9Q9BWV2 254 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 TRIM8Q9BZR9 551 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 PRDM8Q9NQV8 689 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 EPHA6Q9UF33 1036 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 FBXW2Q9UKT8 454 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 EDARQ9UNE0 448 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 A0A087WXM4 84 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 CENPXA8MT69 81 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 TOP3BO95985 862 aaKnown RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 TGFB1P01137 390 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 IFNW1P05000 195 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 PGRP06401 933 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 THEGLP0DJG4 465 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 POU1F1P28069 291 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 TIA1P31483 386 aaKnown RBP eCLIP7.29□□□□□ -1.24
TCF4-216ENST00000562680 GUCA1AP43080 201 aaPredicted RBP7.29□□□□□ -1.24
TCF4-216ENST00000562680 IL5RAQ01344 420 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 NFATC4Q14934 902 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 EIPR1Q53HC9 387 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms