RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 OGDHLQ9ULD0 1010 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 KLK4Q9Y5K2 254 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 N6AMT1Q9Y5N5 214 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 C2orf78A6NCI8 922 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 RGS13O14921 159 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 ADAM12O43184 909 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 SNX4O95219 450 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 HLA-EP13747 358 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 ACPPP15309 386 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 RPL17P18621 184 aaKnown RBP13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 CYP2A7P20853 494 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 TEAD4Q15561 434 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 TRIM71Q2Q1W2 868 aaKnown RBP13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 HKDC1Q2TB90 917 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 TIMM50Q3ZCQ8 353 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 CYP27C1Q4G0S4 372 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 TSEN54Q7Z6J9 526 aaKnown RBP13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 CCDC190Q86UF4 302 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 VRK3Q8IV63 474 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 OR9Q2Q8NGE9 314 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 WFDC5Q8TCV5 224 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 SPATA9Q9BWV2 254 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 OR2B2Q9GZK3 357 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 CORO2BQ9UQ03 480 aa13.46□□□□□ -0.26
VPS9D1-202ENST00000561976 GABRR3A8MPY1 467 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 SCAMP2O15127 329 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 PCDH7O60245 1069 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 CELF2O95319 508 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 PPIBP23284 216 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 PCGF2P35227 344 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 PIK3CBP42338 1070 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 SLC11A1P49279 550 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 GAB1Q13480 694 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 EIF4HQ15056 248 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 CDKN3Q16667 212 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 ATP13A5Q4VNC0 1218 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 IFI44LQ53G44 452 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 FAM26DQ5JW98 314 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 ATAD3CQ5T2N8 411 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 SLX4IPQ5VYV7 408 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 MFSD14CQ5VZR4 134 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 RAVER1Q8IY67 606 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 APCDD1Q8J025 514 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 OR4A15Q8NGL6 344 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 ASB11Q8WXH4 323 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 MARCH5Q9NX47 278 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 CRNNQ9UBG3 495 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 LINC00854A0A1B0GVQ3 168 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 NPIPB15A6NHN6 443 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 CKBP12277 381 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 B4GALNT1Q00973 533 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 MICAQ29983 383 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 LRRC26Q2I0M4 334 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 LRRC66Q68CR7 880 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 RETSATQ6NUM9 610 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 NPAS3Q8IXF0 933 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 LILRB4Q8NHJ6 448 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 WDR36Q8NI36 951 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 C9orf43Q8TAL5 461 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 C2orf15Q8WU43 125 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 CHAC2Q8WUX2 184 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 TCF25Q9BQ70 676 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 CCDC177Q9NQR7 707 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 SLC6A14Q9UN76 642 aa13.45□□□□□ -0.26
VPS9D1-202ENST00000561976 EFCAB10A6NFE3 127 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 A8MV72 311 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 NPIPB8E9PQR5 432 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 IGHA2P01877 340 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ANXA4P09525 319 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 TIE1P35590 1138 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 HTR3AP46098 478 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CDC42P60953 191 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ARMC4Q5T2S8 1044 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 NRARPQ7Z6K4 114 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 FBXO22Q8NEZ5 403 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ST13P5Q8NFI4 369 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 GPR156Q8NFN8 814 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 OR6F1Q8NGZ6 308 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 SDHCQ99643 169 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CCDC32Q9BV29 185 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CNPPD1Q9BV87 410 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CHST8Q9H2A9 424 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 DYRK4Q9NR20 520 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 GNG14A0A1W2PPG7 69 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ANKRD34BA5PLL1 514 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 FAM172BPA6NC97 362 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 TMEM229AB2RXF0 380 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 J3KTA2 159 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CCRL2O00421 344 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ADAMTS4O75173 837 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 GCM2O75603 506 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ETFAP13804 333 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 GABRB1P18505 474 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 POU1F1P28069 291 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms