RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CATSPER2Q96P56 530 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 AIF1LQ9BQI0 150 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 PARD6BQ9BYG5 372 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 SLC6A16Q9GZN6 736 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 DRC3Q9H069 523 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 GPRC5BQ9NZH0 403 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 COPG2Q9UBF2 871 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 FETUBQ9UGM5 382 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 MAN2B2Q9Y2E5 1009 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 A0A1B0GTL3 188 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 SMIM23A6NLE4 172 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 K7EPI3 171 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 TXNDC9O14530 226 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 SOCS6O14544 535 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 RDH16O75452 317 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 KLHL18O94889 574 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 NSA2O95478 260 aaKnown RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 PDGFAP04085 211 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 S100BP04271 92 aaPredicted RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 ZNF888P0CJ79 500 aaPredicted RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 PYGBP11216 843 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 COL6A2P12110 1019 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 HNRNPH1P31943 449 aaKnown RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 GRK3P35626 688 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 AHRP35869 848 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 FOLR3P41439 243 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 CCR10P46092 362 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 OLR1P78380 273 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 DSG2Q14126 1118 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 XKR6Q5GH73 641 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 TAOK1Q7L7X3 1001 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 LRRC70Q7Z2Q7 622 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 MRGPREQ86SM8 312 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 TEX9Q8N6V9 391 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 PTGR2Q8N8N7 351 aaPredicted RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 APOBEC4Q8WW27 367 aaKnown RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 MVB12AQ96EY5 273 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 SCYL1Q96KG9 808 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 FAM117AQ9C073 453 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 C12orf65Q9H3J6 166 aaKnown RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 WDR54Q9H977 334 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 CNOT10Q9H9A5 744 aaKnown RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 HCN3Q9P1Z3 774 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 PSMC3IPQ9P2W1 217 aaPredicted RBP13.17□□□□□ -0.3
TPM1-230ENST00000561266 TRPC4Q9UBN4 977 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 EMCNQ9ULC0 261 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 NAALAD2Q9Y3Q0 740 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 HS3ST3B1Q9Y662 390 aa13.17□□□□□ -0.3
TPM1-230ENST00000561266 A0A0G2JN53 185 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 E2F3O00716 465 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 PPP6CO00743 305 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 CLGNO14967 610 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 GFAPP14136 432 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 CASP2P42575 452 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 ALDH18A1P54886 795 aaKnown RBP13.16□□□□□ -0.3
TPM1-230ENST00000561266 RAB8AP61006 207 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 PCDH1Q08174 1060 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 PWP1Q13610 501 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 PCBP2Q15366 365 aaKnown RBP eCLIP13.16□□□□□ -0.32e-12■■■■□ 19.4
TPM1-230ENST00000561266 DEFB134Q4QY38 66 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 TOR1AIP1Q5JTV8 583 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 COLEC12Q5KU26 742 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 KIRREL2Q6UWL6 708 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 TMIGD1Q6UXZ0 262 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 GOLGA7Q7Z5G4 137 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 APLFQ8IW19 511 aaPredicted RBP13.16□□□□□ -0.3
TPM1-230ENST00000561266 THAP4Q8WY91 577 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.16□□□□□ -0.3
TPM1-230ENST00000561266 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 C8orf44Q96CB5 159 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 MTBPQ96DY7 904 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 C17orf62Q9BQA9 187 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 ARHGAP9Q9BRR9 750 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 YIPF2Q9BWQ6 316 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 ING2Q9H160 280 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 EHD1Q9H4M9 534 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 NT5DC2Q9H857 520 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 ZBTB26Q9HCK0 441 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 OPTCQ9UBM4 332 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
TPM1-230ENST00000561266 PADI2Q9Y2J8 665 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 SLC22A7Q9Y694 548 aa13.16□□□□□ -0.3
TPM1-230ENST00000561266 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 SYCE1LA8MT33 242 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 A8MT66 165 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 OR7A17O14581 309 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 GALR3O60755 368 aaPredicted RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 H2AFYO75367 372 aaKnown RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 BMP10O95393 424 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 RBP1P09455 135 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 EEF1DP29692 281 aaKnown RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 CCL11P51671 97 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 IRF8Q02556 426 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms