RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 V9GYY5 206 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 TNIKQ9UKE5 1360 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RAD54L2Q9Y4B4 1467 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ASTN2O75129 1339 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 ATXN2Q99700 1313 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 ARHGEF40Q8TER5 1519 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 A0A0U1RQV5 110 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 A0A0U1RRA0 63 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 A0A1B0GTQ1 180 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TMEM89A2RUT3 159 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM90A10PA6NDY2 464 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM181BA6NEQ2 426 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ANKRD61A6NGH8 418 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 OR52A4PA6NMU1 304 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TMCO5BA8MYB1 307 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 B4DGG1 531 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 C9JVG2 144 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PPIAL4DF5H284 164 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MS4A18H0YCH9 400 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PDXKO00764 312 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MDM4O15151 490 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FOXN1O15353 648 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 STX7O15400 261 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 LAMTOR5O43504 91 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 GPR137BO60478 399 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 JAK2O60674 1132 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM20BO75063 409 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SNNO75324 88 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 ECI2O75521 394 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 NEURL1O76050 574 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TOP3BO95985 862 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 PLAUP00749 431 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 IGHEP01854 428 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MBP02144 154 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MT-ND1P03886 318 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 S100A6P06703 90 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 H1F0P07305 194 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 IVLP07476 585 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ANXA4P09525 319 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 IQCF3P0C7M6 154 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 GSTT2P0CG29 244 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 GSTT2BP0CG30 244 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SMIM18P0DKX4 95 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 INSRRP14616 1297 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZNF3P17036 446 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 AMD1P17707 334 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 BMP7P18075 431 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PI3P19957 117 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PTNP21246 168 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MAOAP21397 527 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MSR1P21757 451 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PAX7P23759 505 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MPZP25189 248 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ARRB2P32121 409 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PIGAP37287 484 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 EIF2S3P41091 472 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 MAGEA9P43362 315 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 OR3A3P47888 321 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 OR1G1P47890 313 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 STARP49675 285 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 BCAP31P51572 246 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 LIMK2P53671 638 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 AP3M2P53677 418 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CDH4P55283 916 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PRMT2P55345 433 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 YWHAGP61981 247 aaKnown RBP eCLIP1.93□□□□□ -2.1
RTF1-207ENST00000561076 HERV-K104P63124 156 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FKBP1BP68106 108 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 NOP14P78316 857 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 CYP4F2P78329 520 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ABATP80404 500 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CSTF1Q05048 431 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM27E3Q08E93 113 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ASPHQ12797 758 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 BNIP1Q12981 228 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CDH18Q13634 790 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 COTL1Q14019 142 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 HNRNPDQ14103 355 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 GK2Q14410 553 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 RFTN1Q14699 578 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 P2RY14Q15391 338 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TXNRD1Q16881 649 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 HKDC1Q2TB90 917 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ADPRMQ3LIE5 342 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MPPE1Q53F39 396 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 AGKQ53H12 422 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZNF542PQ5EBM4 170 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 XKR3Q5GH77 459 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FGD3Q5JSP0 725 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PIP5KL1Q5T9C9 394 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 C20orf194Q5TEA3 1177 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 METTL11BQ5VVY1 283 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 RAET1LQ5VY80 246 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PLCXD3Q63HM9 321 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FRG2Q64ET8 278 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SNRNP48Q6IEG0 339 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM166AQ6J272 317 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZSCAN25Q6NSZ9 544 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 RGMBQ6NW40 437 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms