RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MESP1Q9BRJ9 268 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SLC6A16Q9GZN6 736 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 SOX17Q9H6I2 414 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 ZNF282Q9UDV7 671 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 NXT1Q9UKK6 140 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 HS3ST3B1Q9Y662 390 aa14.48□□□□□ -0.09
SNRPA1-213ENST00000560856 ARGFXA6NJG6 315 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 C4orf51C9J302 202 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 K7EPI3 171 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 SOCS6O14544 535 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 PRPF4O43172 522 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 DNAJB6O75190 326 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 H2AFYO75367 372 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 SERPINA6P08185 405 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 RBP1P09455 135 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 CXCR2P25025 360 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 ALDH18A1P54886 795 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 MAT1AQ00266 395 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 KLC1Q07866 573 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 RBBP5Q15291 538 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 PCBP2Q15366 365 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 PFKFB4Q16877 469 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 TSNAXIP1Q2TAA8 658 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 WDR93Q6P2C0 686 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 TMIGD1Q6UXZ0 262 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 SH2D5Q6ZV89 423 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 ZC3H7AQ8IWR0 971 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 ZNF843Q8N446 348 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 TBC1D19Q8N5T2 526 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 SNX31Q8N9S9 440 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 TRPV3Q8NET8 790 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 ZCCHC10Q8TBK6 192 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 UTP15Q8TED0 518 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 NACC2Q96BF6 587 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 MIEF2Q96C03 454 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 IP6K3Q96PC2 410 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 PITHD1Q9GZP4 211 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 ING2Q9H160 280 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 KLHL31Q9H511 634 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 MKKSQ9NPJ1 570 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 P4HTMQ9NXG6 502 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 PSMC3IPQ9P2W1 217 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 TRPC4Q9UBN4 977 aa14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 V9GYY5 206 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-213ENST00000560856 K7EM74 188 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 SGK494L7N484 410 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 MASP2O00187 686 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 CLGNO14967 610 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 GALR3O60755 368 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 CEACAM4O75871 244 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 KLHL18O94889 574 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 BMP10O95393 424 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 B3GALT4O96024 378 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 ALOX12P18054 663 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 HSD17B3P37058 310 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 AVPR1BP47901 424 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 OCA2Q04671 838 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 RGS1Q08116 209 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 CHIT1Q13231 466 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 XKR6Q5GH73 641 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 ADNP2Q6IQ32 1131 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 KIRREL2Q6UWL6 708 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 TDRPQ86YL5 185 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 PRSS58Q8IYP2 241 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 CYP4X1Q8N118 509 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 TMEM102Q8N9M5 508 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 AENQ8WTP8 325 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 UBLCP1Q8WVY7 318 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 PTCD3Q96EY7 689 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 ABHD17AQ96GS6 310 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 RHBGQ9H310 441 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 ANKHQ9HCJ1 492 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 MLXIPLQ9NP71 852 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 SEMA3GQ9NS98 782 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 CPSF2Q9P2I0 782 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 XPR1Q9UBH6 696 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 OPTCQ9UBM4 332 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 NAALAD2Q9Y3Q0 740 aa14.46□□□□□ -0.09
SNRPA1-213ENST00000560856 IQANK1A0A1B0GTG1 560 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 FOXO6A8MYZ6 492 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 RDH16O75452 317 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 JRKO75564 520 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 SIX3O95343 332 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 SERPIND1P05546 499 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 ZNF888P0CJ79 500 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 SFTPCP11686 197 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 GFAPP14136 432 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 IRF8Q02556 426 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 HERC3Q15034 1050 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 RASA2Q15283 850 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 ERCC6LQ2NKX8 1250 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 ADPRMQ3LIE5 342 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 MED25Q71SY5 747 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 KRT78Q8N1N4 520 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 TEX9Q8N6V9 391 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 PTGR2Q8N8N7 351 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 TTLQ8NG68 377 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 OR51Q1Q8NH59 317 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms