RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 FOXQ1Q9C009 403 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 BHLHE41Q9C0J9 482 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 PRM3Q9NNZ6 103 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 SLC6A20Q9NP91 592 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 MRPS30Q9NP92 439 aaKnown RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 SPHK1Q9NYA1 384 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 DOCK9Q9BZ29 2069 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 DHRS12A0PJE2 317 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 FEZF1A0PJY2 475 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 SAP18O00422 153 aaKnown RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 PLPP1O14494 284 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 B3GALT4O96024 378 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CHRM5P08912 532 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 ZCCHC18P0CG32 403 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 UMPSP11172 480 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 GGT1P19440 569 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 ATP6V1C1P21283 382 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 PEX2P28328 305 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 TPP2P29144 1249 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 CMPK1P30085 196 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 GZMMP51124 257 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 FZD2Q14332 565 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 LPCAT4Q643R3 524 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 ZNF425Q6IV72 752 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 IYDQ6PHW0 289 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 R3HCC1LQ7Z5L2 792 aaKnown RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 TICAM1Q8IUC6 712 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 ADGRG5Q8IZF4 528 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 FRMD1Q8N878 549 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 ZNF548Q8NEK5 533 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 VPS37AQ8NEZ2 397 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 OR2T12Q8NG77 320 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 OR52E4Q8NGH9 312 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CDC26Q8NHZ8 85 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CREB3L4Q8TEY5 395 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CANT1Q8WVQ1 401 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 RLN3Q8WXF3 142 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 MIEF2Q96C03 454 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 NAF1Q96HR8 494 aaKnown RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 ZNF570Q96NI8 536 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 TPSD1Q9BZJ3 242 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 KLHL4Q9C0H6 718 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 RPF2Q9H7B2 306 aaKnown RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 GORASP2Q9H8Y8 452 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 COPS7BQ9H9Q2 264 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 USP22Q9UPT9 525 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 FAM220BPB1ANY3 271 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 RNASET2O00584 256 aaKnown RBP12.35□□□□□ -0.43
SNX1-211ENST00000560829 YY2O15391 372 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 OR1F1O43749 312 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 LCMT2O60294 686 aaKnown RBP12.35□□□□□ -0.43
SNX1-211ENST00000560829 KLK1P06870 262 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 FURINP09958 794 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 BSGP35613 385 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 GRK3P35626 688 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 GSTM5P46439 218 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 MLLT1Q03111 559 aaPredicted RBP12.35□□□□□ -0.43
SNX1-211ENST00000560829 MTX3Q5HYI7 312 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 GLYATQ6IB77 296 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 IZUMO2Q6UXV1 221 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 PAGE2Q7Z2X7 111 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 DCP2Q8IU60 420 aaKnown RBP12.35□□□□□ -0.43
SNX1-211ENST00000560829 ADGRF3Q8IZF5 1079 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 SIX5Q8N196 739 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 SPEM1Q8N4L4 309 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 FBXL6Q8N531 539 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 DTWD1Q8N5C7 304 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 PAPD5Q8NDF8 572 aaKnown RBP12.35□□□□□ -0.43
SNX1-211ENST00000560829 ADCY4Q8NFM4 1077 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 OR10A6Q8NH74 314 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 CLDN23Q96B33 292 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 SLC22A18Q96BI1 424 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 QRFPRQ96P65 431 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 PANX1Q96RD7 426 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 F2RL3Q96RI0 385 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 POT1Q9NUX5 634 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 ATAD3AQ9NVI7 634 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 ADAM29Q9UKF5 820 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 ERVK-11Q9UQG0 969 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 INVSQ9Y283 1065 aa12.35□□□□□ -0.43
SNX1-211ENST00000560829 OR5K4A6NMS3 321 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 METTL12A8MUP2 240 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 TBX19O60806 448 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 PSMA4P25789 261 aaKnown RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 CD27P26842 260 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 AHRP35869 848 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ARFIP1P53367 373 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 CYP4F2P78329 520 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ABHD18Q0P651 414 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 KIR2DS3Q14952 304 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ZIC1Q15915 447 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ADPRMQ3LIE5 342 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 TLDC1Q6P9B6 456 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 GPR155Q7Z3F1 870 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ADCK2Q7Z695 626 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 PARGQ86W56 976 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 PDSS2Q86YH6 399 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms