RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 LHCGRP22888 699 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SPANXN4Q5MJ08 99 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 RELL1Q8IUW5 271 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 CHCHD4Q8N4Q1 142 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SHKBP1Q8TBC3 707 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 TFGQ92734 400 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SUSD3Q96L08 255 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 BARD1Q99728 777 aaKnown RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 LRRN3Q9H3W5 708 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 IL36AQ9UHA7 158 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 WASF3Q9UPY6 502 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 TTC34A8MYJ7 566 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF487B1APH4 448 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 NPIPA5E9PKD4 350 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 CAPN5O15484 640 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 HTRA2O43464 458 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PIM1P11309 404 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PSMA6P60900 246 aaKnown RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PTCHD3Q3KNS1 767 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 SHQ1Q6PI26 577 aaKnown RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 AGTRAPQ6RW13 159 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PRSS55Q6UWB4 352 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 DBF4BQ8NFT6 615 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF516Q92618 1163 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 KCNJ9Q92806 393 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 KCNN1Q92952 543 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ITFG2Q969R8 447 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 RBP7Q96R05 134 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMEM168Q9H0V1 697 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 SMOC2Q9H3U7 446 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 NPIPA1Q9UND3 350 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 A0A1W2PPW3 197 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 CLCN2P51788 898 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 TRAM1Q15629 374 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 MEP1AQ16819 746 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 CYBRD1Q53TN4 286 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ENDOVQ8N8Q3 282 aaKnown RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 TESCQ96BS2 214 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PCDH10Q9P2E7 1040 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PPLO60437 1756 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 C2orf92A0A1B0GVN3 265 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 KDM4FA0A1W2PPD8 638 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMEM233B4DJY2 109 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 C9J4A7 227 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 GNAO1P09471 354 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 CLCNKAP51800 687 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PTGR1Q14914 329 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PLEKHN1Q494U1 663 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 SMYD5Q6GMV2 418 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMED4Q7Z7H5 227 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF366Q8N895 744 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 MOAP1Q96BY2 351 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 LPIN3Q9BQK8 851 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 C11orf84Q9BUA3 381 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF350Q9GZX5 532 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC17A6Q9P2U8 582 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 SH2B3Q9UQQ2 575 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ADGRB2O60241 1585 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 JUNP05412 331 aaKnown RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ITGA5P08648 1049 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PET100P0DJ07 73 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ANXA3P12429 323 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 AGXTP21549 392 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 COL9A3Q14050 684 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 PDSS1Q5T2R2 415 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 DCAF12L1Q5VU92 463 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 XKR5Q6UX68 686 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 HFE2Q6ZVN8 426 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 GID4Q8IVV7 300 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 TAC3Q9UHF0 121 aa12.8□□□□□ -0.36
CSPG4P11-201ENST00000560634 A0A1B0GVI7 797 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 HTR3EA5X5Y0 456 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 TRIM64CA6NLI5 447 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 NDUFS4O43181 175 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PLGP00747 810 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 RPL17P18621 184 aaKnown RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 NPR2P20594 1047 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 AFF1P51825 1210 aaKnown RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PRMT2P55345 433 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 GNG2P59768 71 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 DNASE1L3Q13609 305 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 ENPP7Q6UWV6 458 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PLEKHG7Q6ZR37 379 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PHC2Q8IXK0 858 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 DENND1AQ8TEH3 1009 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC35F5Q8WV83 523 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC5A11Q8WWX8 675 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SEC61A2Q9H9S3 476 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 MYNNQ9NPC7 610 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 M0R233 179 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms