RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 DET1Q7L5Y6 550 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SLC46A3Q7Z3Q1 461 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 C11orf74Q86VG3 221 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 RALGPS2Q86X27 583 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 CALHM3Q86XJ0 350 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 RNF130Q86XS8 419 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 DENND1CQ8IV53 801 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TP53INP2Q8IXH6 220 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 YAF2Q8IY57 180 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 CPNE9Q8IYJ1 553 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 UBQLNLQ8IYU4 475 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 PARP16Q8N5Y8 322 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 ARL14EPQ8N8R7 260 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 HJURPQ8NCD3 748 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 OR10A6Q8NH74 314 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SUN5Q8TC36 379 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 NELL1Q92832 810 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 IRF7Q92985 503 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 IGSF8Q969P0 613 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 ULK4Q96C45 1275 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 OTUB2Q96DC9 234 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 HRASLS5Q96KN8 279 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 DHRS1Q96LJ7 313 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 WDFY2Q96P53 400 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TRNT1Q96Q11 434 aaKnown RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 OR52E6Q96RD3 313 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 FAM126AQ9BYI3 521 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 REXO4Q9GZR2 422 aaKnown RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SOX17Q9H6I2 414 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 BRD9Q9H8M2 597 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SMURF2Q9HAU4 748 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 LRTM1Q9HBL6 345 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 PTTG3PQ9NZH4 202 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 OPTCQ9UBM4 332 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TMEFF2Q9UIK5 374 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 KLHL21Q9UJP4 597 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 AGO1Q9UL18 857 aaKnown RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SNX7Q9UNH6 387 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SNX6Q9UNH7 406 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 CRYL1Q9Y2S2 319 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 V9GYQ6 96 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 FRYLO94915 3013 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 KMT2EQ8IZD2 1858 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 GCN1Q92616 2671 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TEX51A0A1B0GUA7 166 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 SERTM1A2A2V5 107 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CCDC182A6NF36 153 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 H7C0S8 307 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CCRL2O00421 344 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TOR1BO14657 336 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 SLC9A3R1O14745 358 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PROM1O43490 865 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 NOBOXO60393 691 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 MFN2O95140 757 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 KLKB1P03952 638 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CDK1P06493 297 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CAPN1P07384 714 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 ATXN1LP0C7T5 689 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CBSLP0DN79 551 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PIPP12273 146 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF7P17097 686 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CTPS1P17812 591 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 DDX5P17844 614 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TSPAN8P19075 237 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PRPS1L1P21108 318 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 LPOP22079 712 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 RPS3P23396 243 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PRPH2P23942 346 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 GDI1P31150 447 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CBSP35520 551 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PIGAP37287 484 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PIK3CBP42338 1070 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 IL12RB1P42701 662 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CHRNA4P43681 627 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 HTR3AP46098 478 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 FOXA1P55317 472 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CLDN8P56748 225 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 STARD6P59095 220 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CYP4F8P98187 520 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 DMPKQ09013 629 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 NPRL3Q12980 569 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF177Q13360 481 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CAMK2GQ13555 558 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 C1DQ13901 141 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 SF3B4Q15427 424 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 MLF2Q15773 248 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 MPPE1Q53F39 396 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 ALFQ53S48 1182 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 MEDAGQ5VYS4 303 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TXNDC8Q6A555 127 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 DESI1Q6ICB0 168 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 MZT2BQ6NZ67 158 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 FAHD1Q6P587 224 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PAQR3Q6TCH7 311 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 VITQ6UXI7 678 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 EIF3MQ7L2H7 374 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 ASCL5Q7RTU5 278 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 DGLUCYQ7Z3D6 616 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms