RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 PRAMEF13Q5VWM6 474 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 LIPJQ5W064 366 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 OOSP2Q86WS3 158 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 DDIASQ8IXT1 998 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 KLHDC8AQ8IYD2 350 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 KRT78Q8N1N4 520 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 GALNT6Q8NCL4 622 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 OR4E2Q8NGC2 313 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 OR52E1Q8NGJ3 308 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 ESAMQ96AP7 390 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 PYCR2Q96C36 320 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 NTMT1Q9BV86 223 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 SLC29A3Q9BZD2 475 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 ELOVL6Q9H5J4 265 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 RABEP2Q9H5N1 569 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 INTS7Q9NVH2 962 aaKnown RBP11.3□□□□□ -0.6
LDLR-212ENST00000560467 RIC8BQ9NVN3 520 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 NMRK1Q9NWW6 199 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 ZNF624Q9P2J8 865 aaPredicted RBP11.3□□□□□ -0.6
LDLR-212ENST00000560467 CIDEBQ9UHD4 219 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 ARL2BPQ9Y2Y0 163 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 FIS1Q9Y3D6 152 aa11.3□□□□□ -0.6
LDLR-212ENST00000560467 MN1Q10571 1320 aaPredicted RBP11.3□□□□□ -0.6
LDLR-212ENST00000560467 UTP20O75691 2785 aaKnown RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 GOLGA8QA0A0J9YX86 632 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 GOLGA8OA6NCC3 632 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 LRRC14BA6NHZ5 514 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 C2orf74A8MZ97 194 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 GOLGA8NF8WBI6 632 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 DIAPH2O60879 1101 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 ULK1O75385 1050 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 FKBP9O95302 570 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 PDGFAP04085 211 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 TSPAN8P19075 237 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 PKLRP30613 574 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 SEPHS1P49903 392 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 CCR8P51685 355 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 AQP5P55064 265 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 UBE2IP63279 158 aaKnown RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 SH3BP2P78314 561 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 MAP7Q14244 749 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 ERV3-1Q14264 604 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 KIR2DS3Q14952 304 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 TERF2Q15554 542 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 C18orf21Q32NC0 220 aaPredicted RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 CCSMST1Q4G0I0 132 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 CRTC2Q53ET0 693 aaPredicted RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 DUS1LQ6P1R4 473 aaKnown RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 LCTLQ6UWM7 567 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 C6orf15Q6UXA7 325 aaPredicted RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 ATCAYQ86WG3 371 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 ZNF781Q8N8C0 355 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 TEX19Q8NA77 164 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 HMGCLL1Q8TB92 370 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 ZNF473Q8WTR7 871 aaKnown RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 SLC5A11Q8WWX8 675 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 PTCD3Q96EY7 689 aaKnown RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 TMEM79Q9BSE2 394 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 EFCAB11Q9BUY7 163 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 SGPP1Q9BX95 441 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 EPB41L1Q9H4G0 881 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 UCK1Q9HA47 277 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
LDLR-212ENST00000560467 TRPS1Q9UHF7 1281 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 PLAGL1Q9UM63 463 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 SNX7Q9UNH6 387 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 PCDHGA11Q9Y5H2 935 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 USH1CQ9Y6N9 552 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 ICE1Q9Y2F5 2266 aa11.29□□□□□ -0.6
LDLR-212ENST00000560467 PIPSLA2A3N6 862 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 GSAPA4D1B5 854 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 CDC14CA4D256 554 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 LILRA5A6NI73 299 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 MKRN2OSH3BPM6 223 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 SNX3O60493 162 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 DCTN3O75935 186 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 DNAJB5O75953 348 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 KIAA0754O94854 1291 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 CAPN1P07384 714 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 ANKRD34CP0C6C1 535 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 C1GALT1C1LP0DN25 315 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 NPPBP16860 134 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 TYRP1P17643 537 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 SERPINB1P30740 379 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 ZNF33BQ06732 778 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 CHIT1Q13231 466 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 GPR18Q14330 331 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 TBCCQ15814 346 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 NXNQ6DKJ4 435 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 TCTN3Q6NUS6 607 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 SUSD1Q6UWL2 747 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 TMEM26Q6ZUK4 368 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 ADCK2Q7Z695 626 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 PLXDC1Q8IUK5 500 aa11.28□□□□□ -0.6
LDLR-212ENST00000560467 C2orf73Q8N5S3 287 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms