RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PTPRZ1P23471 2315 aaPredicted RBP8.95□□□□□ -0.98
HERC1-206ENST00000559996 KIF26BQ2KJY2 2108 aa8.95□□□□□ -0.98
HERC1-206ENST00000559996 ATP6AP2A0A1C7CYW4 349 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 LRIT2A6NDA9 550 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 SLCO1B7G3V0H7 640 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 LSM1O15116 133 aaKnown RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 HYAL3O43820 417 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 DNAJB6O75190 326 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 SKAP2O75563 359 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 CLEC3AO75596 197 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 ATP6AP2O75787 350 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 KRT6AP02538 564 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 STATHP02808 62 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 KRT6BP04259 564 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 SERPINA6P08185 405 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 FTH1P19P0C7X4 201 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 PCNAP12004 261 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 CEACAM1P13688 526 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 EPHA3P29320 983 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 HMOX2P30519 316 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 CCKBRP32239 447 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 KRT6CP48668 564 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 HK2P52789 917 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 AQP5P55064 265 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 RAE1P78406 368 aaKnown RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 HSD11B2P80365 405 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 TRA2AQ13595 282 aaKnown RBP eCLIP8.94□□□□□ -0.98
HERC1-206ENST00000559996 COL9A2Q14055 689 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 SPIDRQ14159 915 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 PDCD2Q16342 344 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 HIST2H2ACQ16777 129 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 HKDC1Q2TB90 917 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 DEFB110Q30KQ9 67 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 LSM12Q3MHD2 195 aaKnown RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 RFTN2Q52LD8 501 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 PAGE2BQ5JRK9 111 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 C6orf136Q5SQH8 315 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 PRAMEF17Q5VTA0 474 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 HIST2H2AA3Q6FI13 130 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 DHRS13Q6UX07 377 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 ADCK2Q7Z695 626 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 MYLK4Q86YV6 388 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 KCT2Q8NC54 265 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 OR1L3Q8NH93 324 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 WDR48Q8TAF3 677 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 SLC13A3Q8WWT9 602 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 STON2Q8WXE9 905 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 UBE2E3Q969T4 207 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 MS4A6EQ96DS6 147 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 APIPQ96GX9 242 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 SEC16BQ96JE7 1060 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 FAR2Q96K12 515 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 FCRL1Q96LA6 429 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 PPP1R36Q96LQ0 422 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 F2RL3Q96RI0 385 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 SPRTNQ9H040 489 aaPredicted RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 OR51B5Q9H339 312 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 AKTIPQ9H8T0 292 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 BRF2Q9HAW0 419 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 PDE7BQ9NP56 450 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 NPHS2Q9NP85 383 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 PRDM7Q9NQW5 492 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 STARD5Q9NSY2 213 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 SIRT5Q9NXA8 310 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 KLHL14Q9P2G3 628 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 ADGRE2Q9UHX3 823 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 DCTN4Q9UJW0 460 aa8.94□□□□□ -0.98
HERC1-206ENST00000559996 MRPS2Q9Y399 296 aaKnown RBP8.94□□□□□ -0.98
HERC1-206ENST00000559996 GOLGA8QA0A0J9YX86 632 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 PMS2P1A4D2B8 440 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 FITM1A5D6W6 292 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 GOLGA8OA6NCC3 632 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 ANKDD1BA6NHY2 528 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 GOLGA8NF8WBI6 632 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 FOXS1O43638 330 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 SRPX2O60687 465 aaPredicted RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 SH3BGRLO75368 114 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 RASSF9O75901 435 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 KCNK5O95279 499 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 FAM107AO95990 144 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 B3GALT4O96024 378 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 MT-CO3P00414 261 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 ALDOCP09972 364 aaKnown RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 HSD3B1P14060 373 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 CD1EP15812 388 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 PTX3P26022 381 aaPredicted RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 HSD3B2P26439 372 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 GSTM2P28161 218 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 BSGP35613 385 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 ARL1P40616 181 aaPredicted RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 VSX2P58304 361 aaPredicted RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 CYP4F2P78329 520 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 CSTF3Q12996 717 aaKnown RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 IFT88Q13099 833 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 PWP1Q13610 501 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 CUL3Q13618 768 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 NAA25Q14CX7 972 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 GPR19Q15760 415 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 ISXQ2M1V0 245 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 ZC3H12BQ5HYM0 836 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms