RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FAM92BQ6ZTR7 304 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 ZFAND4Q86XD8 727 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 SCUBE1Q8IWY4 988 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 OR4D9Q8NGE8 314 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 WDR48Q8TAF3 677 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 SLC5A11Q8WWX8 675 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 NEIL2Q969S2 332 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 GFM1Q96RP9 751 aaKnown RBP15.84■□□□□ 0.13
TPM1-219ENST00000559397 CD180Q99467 661 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 MAP3K3Q99759 626 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 DPYSL5Q9BPU6 564 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 EHD1Q9H4M9 534 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 LRTM1Q9HBL6 345 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 SLC6A20Q9NP91 592 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 CUEDC1Q9NWM3 386 aaPredicted RBP15.84■□□□□ 0.13
TPM1-219ENST00000559397 NOP53Q9NZM5 478 aaKnown RBP15.84■□□□□ 0.13
TPM1-219ENST00000559397 CDV3Q9UKY7 258 aaKnown RBP15.84■□□□□ 0.13
TPM1-219ENST00000559397 KLK4Q9Y5K2 254 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.84■□□□□ 0.13
TPM1-219ENST00000559397 HEATR5BQ9P2D3 2071 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 CEP250Q9BV73 2442 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 SPAARA0A1B0GVQ0 90 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 ANKRD28O15084 1053 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 NRP2O60462 931 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 RSL1D1O76021 490 aaKnown RBP15.83■□□□□ 0.13
TPM1-219ENST00000559397 CCNDBP1O95273 360 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 CMPK1P30085 196 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 ZFP36L2P47974 494 aaKnown RBP15.83■□□□□ 0.13
TPM1-219ENST00000559397 NEK2P51955 445 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 INSM1Q01101 510 aaPredicted RBP15.83■□□□□ 0.13
TPM1-219ENST00000559397 MAD2L1Q13257 205 aaPredicted RBP15.83■□□□□ 0.13
TPM1-219ENST00000559397 KIAA0040Q15053 153 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 IMPG1Q17R60 797 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 RSPO4Q2I0M5 234 aaPredicted RBP15.83■□□□□ 0.13
TPM1-219ENST00000559397 WASHC2DQ5SRD0 308 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 IL23RQ5VWK5 629 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 ATG9BQ674R7 924 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 BLOC1S3Q6QNY0 202 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 C16orf89Q6UX73 402 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 C17orf64Q86WR6 236 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 ULK2Q8IYT8 1036 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 DEFB107AQ8IZN7 70 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 ABHD11Q8NFV4 315 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 C1orf50Q9BV19 199 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 MRPL1Q9BYD6 325 aaKnown RBP15.83■□□□□ 0.13
TPM1-219ENST00000559397 SEMA6CQ9H3T2 930 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 SYNDIG1Q9H7V2 258 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 MRPS30Q9NP92 439 aaKnown RBP15.83■□□□□ 0.13
TPM1-219ENST00000559397 C1GALT1Q9NS00 363 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 C1orf109Q9NX04 203 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 NDE1Q9NXR1 346 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 DYRK1BQ9Y463 629 aa15.83■□□□□ 0.13
TPM1-219ENST00000559397 TLCD2A6NGC4 264 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 BBIP1A8MTZ0 92 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 D6RAR5 112 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 CDH1P12830 882 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 GRIA3P42263 894 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 CSTF3Q12996 717 aaKnown RBP15.83■□□□□ 0.12
TPM1-219ENST00000559397 SPIDRQ14159 915 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 CCDC157Q569K6 752 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 CATSPEREQ5SY80 951 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 REP15Q6BDI9 236 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 ZNF425Q6IV72 752 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 CYP20A1Q6UW02 462 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 HACD2Q6Y1H2 254 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 PRSS42Q7Z5A4 293 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 SLITRK4Q8IW52 837 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 PARP9Q8IXQ6 854 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 PGAM4Q8N0Y7 254 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 MTFMTQ96DP5 389 aaKnown RBP15.83■□□□□ 0.12
TPM1-219ENST00000559397 CLPTM1LQ96KA5 538 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 TEX37Q96LM6 180 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 TRAPPC9Q96Q05 1148 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 NPAS2Q99743 824 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 ZMYND15Q9H091 742 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 ACTL8Q9H568 366 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 DENND2DQ9H6A0 471 aaPredicted RBP15.83■□□□□ 0.12
TPM1-219ENST00000559397 KLHL3Q9UH77 587 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 PRPF19Q9UMS4 504 aaKnown RBP15.83■□□□□ 0.12
TPM1-219ENST00000559397 KLHL20Q9Y2M5 609 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 PCDHGA11Q9Y5H2 935 aa15.83■□□□□ 0.12
TPM1-219ENST00000559397 IGHV5-51A0A0C4DH38 117 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 IGHV5-10-1A0A0J9YXX1 117 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 SLC22A3O75751 556 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 FTH1P19P0C7X4 201 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 C1GALT1C1LP0DN25 315 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 G6PDP11413 515 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 HSD3B1P14060 373 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 PVRP15151 417 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 ST6GAL1P15907 406 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 CAPN3P20807 821 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 CDH3P22223 829 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 HSD3B2P26439 372 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 VARSP26640 1264 aaKnown RBP15.82■□□□□ 0.12
TPM1-219ENST00000559397 PLA2G5P39877 138 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 PDX1P52945 283 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 NME5P56597 212 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 UFM1P61960 85 aa15.82■□□□□ 0.12
TPM1-219ENST00000559397 RPL38P63173 70 aaKnown RBP15.82■□□□□ 0.12
TPM1-219ENST00000559397 ART3Q13508 389 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms