RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CTNNAL1Q9UBT7 734 aa16.77■□□□□ 0.28
TPM1-218ENST00000559281 PLEKHB1Q9UF11 243 aaPredicted RBP16.77■□□□□ 0.28
TPM1-218ENST00000559281 MAST4O15021 2626 aa16.77■□□□□ 0.27
TPM1-218ENST00000559281 CDC7O00311 574 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 EIF3HO15372 352 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM1-218ENST00000559281 RDH16O75452 317 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 SEC24DO94855 1032 aaPredicted RBP16.76■□□□□ 0.27
TPM1-218ENST00000559281 ITGAMP11215 1152 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 EDN3P14138 238 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 ALOX12P18054 663 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 SCTRP47872 440 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 TNFSF10P50591 281 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 TAS2R39P59534 338 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 SNRPNP63162 240 aaKnown RBP16.76■□□□□ 0.27
TPM1-218ENST00000559281 POU4F1Q01851 419 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 ACTN3Q08043 901 aaPredicted RBP16.76■□□□□ 0.27
TPM1-218ENST00000559281 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
TPM1-218ENST00000559281 NSDHLQ15738 373 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 INAQ16352 499 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 PPP1R3AQ16821 1122 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 BTBD16Q32M84 506 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 C4orf17Q53FE4 359 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 FRA10AC1Q70Z53 315 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 ADAMTSL2Q86TH1 951 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 AFAP1L2Q8N4X5 818 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 ZNF740Q8NDX6 193 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 PLPP5Q8NEB5 264 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 NT5CQ8TCD5 201 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 TSPAN17Q96FV3 270 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 MAGEB10Q96LZ2 347 aaPredicted RBP16.76■□□□□ 0.27
TPM1-218ENST00000559281 RNF32Q9H0A6 362 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 PELI2Q9HAT8 420 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 SLC22A14Q9Y267 594 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 OARD1Q9Y530 152 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 SHANK1Q9Y566 2161 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 HEATR5BQ9P2D3 2071 aa16.76■□□□□ 0.27
TPM1-218ENST00000559281 GALR3O60755 368 aaPredicted RBP16.75■□□□□ 0.27
TPM1-218ENST00000559281 H2AFYO75367 372 aaKnown RBP16.75■□□□□ 0.27
TPM1-218ENST00000559281 JAK1P23458 1154 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 RBBP5Q15291 538 aaKnown RBP16.75■□□□□ 0.27
TPM1-218ENST00000559281 EXT1Q16394 746 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 DEFB134Q4QY38 66 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 NXPE4Q6UWF7 544 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 CYS1Q717R9 158 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 ANKRD37Q7Z713 158 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 PDSS2Q86YH6 399 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 TBC1D20Q96BZ9 403 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 PEX11GQ96HA9 241 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 ZNF354BQ96LW1 612 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 TSNARE1Q96NA8 513 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 CAPS2Q9BXY5 557 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 SAYSD1Q9NPB0 183 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 OLAHQ9NV23 265 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 ABI3Q9P2A4 366 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 ERRFI1Q9UJM3 462 aaPredicted RBP16.75■□□□□ 0.27
TPM1-218ENST00000559281 IKZF3Q9UKT9 509 aa16.75■□□□□ 0.27
TPM1-218ENST00000559281 SPTAN1Q13813 2472 aaKnown RBP16.74■□□□□ 0.27
TPM1-218ENST00000559281 NAV2Q8IVL1 2488 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 IGHV3-20A0A0C4DH32 117 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 NPEPPSL1A6NEC2 478 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 A8MUI8 341 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 MAGEB17A8MXT2 336 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 WDPCPO95876 746 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 CELA2AP08217 269 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 GNAZP19086 355 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 CASQ1P31415 396 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 EFNA3P52797 238 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 ZNF33BQ06732 778 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 ABRAXAS2Q15018 415 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 CAPN12Q6ZSI9 719 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 LANCL3Q6ZV70 420 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 TMPRSS11BQ86T26 416 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 M1APQ8TC57 530 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 MOCOSQ96EN8 888 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 LPAR4Q99677 370 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
TPM1-218ENST00000559281 UTP11Q9Y3A2 253 aaKnown RBP16.74■□□□□ 0.27
TPM1-218ENST00000559281 SPTBN1Q01082 2364 aaKnown RBP16.73■□□□□ 0.27
TPM1-218ENST00000559281 OR5H15A6NDH6 313 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 WIPF3A6NGB9 483 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 ZNF860A6NHJ4 632 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 CHST10O43529 356 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 FHP07954 510 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 GSTA2P09210 222 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 SSTR1P30872 391 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 MRPS25P82663 173 aaKnown RBP16.73■□□□□ 0.27
TPM1-218ENST00000559281 REEP5Q00765 189 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 CAV1Q03135 178 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 ZNF460Q14592 562 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 USP10Q14694 798 aaKnown RBP16.73■□□□□ 0.27
TPM1-218ENST00000559281 TSNQ15631 228 aaKnown RBP16.73■□□□□ 0.27
TPM1-218ENST00000559281 C3orf62Q6ZUJ4 267 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 CEP97Q8IW35 865 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 TCAIMQ8N3R3 496 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 TTLQ8NG68 377 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 OR5T3Q8NGG3 340 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 ANKRD49Q8WVL7 239 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 CPNE1Q99829 537 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 DERL2Q9GZP9 239 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms