RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CACNA2D3Q8IZS8 1091 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 D2HGDHQ8N465 521 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 LRTM1Q9HBL6 345 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 NMRK1Q9NWW6 199 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 C1orf109Q9NX04 203 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 MDC1Q14676 2089 aaKnown RBP17.26■□□□□ 0.35
CLPX-203ENST00000558958 LRIT2A6NDA9 550 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 E9PBE3 544 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 KLHL41O60662 606 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 SH3BGRLO75368 114 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 STATHP02808 62 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 SERPIND1P05546 499 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 ARL4DP49703 201 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 TBL3Q12788 808 aaKnown RBP17.25■□□□□ 0.35
CLPX-203ENST00000558958 KIAA0040Q15053 153 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 TRIP6Q15654 476 aaKnown RBP17.25■□□□□ 0.35
CLPX-203ENST00000558958 SMU1Q2TAY7 513 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 DEFB110Q30KQ9 67 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 ADPRMQ3LIE5 342 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 KHDRBS2Q5VWX1 349 aaKnown RBP17.25■□□□□ 0.35
CLPX-203ENST00000558958 METTL21CQ5VZV1 264 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 CHSY3Q70JA7 882 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 ALYREFQ86V81 257 aaKnown RBP17.25■□□□□ 0.35
CLPX-203ENST00000558958 ZFAND4Q86XD8 727 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 CAMKVQ8NCB2 501 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 NT5CQ8TCD5 201 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 RERGQ96A58 199 aaPredicted RBP17.25■□□□□ 0.35
CLPX-203ENST00000558958 METTL2AQ96IZ6 378 aaKnown RBP17.25■□□□□ 0.35
CLPX-203ENST00000558958 CCDC74BQ96LY2 380 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 F2RL3Q96RI0 385 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 MACROD1Q9BQ69 325 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.25■□□□□ 0.35
CLPX-203ENST00000558958 HEY2Q9UBP5 337 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 RAPGEFL1Q9UHV5 662 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 PLCL2Q9UPR0 1127 aa17.25■□□□□ 0.35
CLPX-203ENST00000558958 SRPX2O60687 465 aaPredicted RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 SEC22BO75396 215 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 RFPL3O75679 317 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 SEMA3DO95025 777 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 SLC35G6P0C7Q6 338 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 HNRNPH1P31943 449 aaKnown RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 ERVK-8P63133 956 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 E2F1Q01094 437 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 ZFP36L1Q07352 338 aaKnown RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 KCNAB1Q14722 419 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 RFTN2Q52LD8 501 aaPredicted RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 TMEM198Q66K66 360 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 FNDC5Q8NAU1 212 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 CHTF18Q8WVB6 975 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 APIPQ96GX9 242 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 ZNF285Q96NJ3 590 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 MRPL1Q9BYD6 325 aaKnown RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 SLC6A16Q9GZN6 736 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 AICDAQ9GZX7 198 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 TOR4AQ9NXH8 423 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 PCDHGA1Q9Y5H4 931 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 GVINP1Q7Z2Y8 2422 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 SPEGQ15772 3267 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 FAM186AA6NE01 2351 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 P2RX6O15547 441 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 ALDOCP09972 364 aaKnown RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 MSL3P1P0C860 447 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 VSX2P58304 361 aaPredicted RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 RPL38P63173 70 aaKnown RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 EMX2Q04743 252 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 RGS1Q08116 209 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 TMEM35AQ53FP2 167 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 MANEAQ5SRI9 462 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 TMTC4Q5T4D3 741 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 SPATA19Q7Z5L4 167 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 CSNK1A1LQ8N752 337 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 RCBTB1Q8NDN9 531 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 DEFB124Q8NES8 71 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 MS4A6EQ96DS6 147 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 C11orf24Q96F05 449 aaPredicted RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 REXO4Q9GZR2 422 aaKnown RBP17.24■□□□□ 0.35
CLPX-203ENST00000558958 KLHL31Q9H511 634 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 TRIM33Q9UPN9 1127 aa17.24■□□□□ 0.35
CLPX-203ENST00000558958 PCNX2A6NKB5 2137 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 SAP18O00422 153 aaKnown RBP17.23■□□□□ 0.35
CLPX-203ENST00000558958 UBDO15205 165 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 EIF2S1P05198 315 aaKnown RBP17.23■□□□□ 0.35
CLPX-203ENST00000558958 CTSBP07858 339 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 FOLR1P15328 257 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 PDX1P52945 283 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 STXBP1P61764 594 aaKnown RBP17.23■□□□□ 0.35
CLPX-203ENST00000558958 ACSM2AQ08AH3 577 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 TRA2AQ13595 282 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLPX-203ENST00000558958 CCDC157Q569K6 752 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 SPIN4Q56A73 249 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 TOR1AIP1Q5JTV8 583 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 WASHC2DQ5SRD0 308 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 PHF19Q5T6S3 580 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 ACSM2BQ68CK6 577 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 UBE3DQ7Z6J8 389 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 B3GNT8Q7Z7M8 397 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 METTL4Q8N3J2 472 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 ZNF655Q8N720 491 aaPredicted RBP17.23■□□□□ 0.35
CLPX-203ENST00000558958 KCT2Q8NC54 265 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 FCRL1Q96LA6 429 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms