RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	MED16	Q9Y2X0	877 aa		6.65	□□□□□ -1.34
MARK3-215	ENST00000558787	MRPS2	Q9Y399	296 aa	Known RBP	6.65	□□□□□ -1.34
MARK3-215	ENST00000558787	KLK4	Q9Y5K2	254 aa		6.65	□□□□□ -1.34
MARK3-215	ENST00000558787	FAM169A	Q9Y6X4	670 aa		6.65	□□□□□ -1.34
MARK3-215	ENST00000558787	SVIL	O95425	2214 aa		6.65	□□□□□ -1.35
MARK3-215	ENST00000558787	CRYBG3	Q68DQ2	2970 aa		6.65	□□□□□ -1.35
MARK3-215	ENST00000558787	LRBA	P50851	2863 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	POLE	Q07864	2286 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787		A0A0A6YYC8	382 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	ZCWPW2	A0A1B0GU75	182 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	OR2W5	A6NFC9	320 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	SDR42E2	A6NKP2	422 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787		E5RI56	91 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787		E7ENX8	843 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787		H3BMM5	538 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787		I3L1I5	382 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MYO1C	O00159	1063 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	NDC80	O14777	642 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	P2RX6	O15547	441 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	PSIP1	O75475	530 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	JRK	O75564	520 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	USP1	O94782	785 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	IPO13	O94829	963 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	HAUS5	O94927	633 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	CLDN1	O95832	211 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	SLC16A8	O95907	504 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	ERVK-10	P10266	1014 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	ERG	P11308	486 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	OGN	P20774	298 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	FUT4	P22083	530 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	FBL	P22087	321 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	NME2	P22392	152 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	SLC1A2	P43004	574 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MAGEA6	P43360	314 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	EFNA3	P52797	238 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	PGGT1B	P53609	377 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MPP1	Q00013	466 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MAT1A	Q00266	395 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	TAP2	Q03519	686 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	OCA2	Q04671	838 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	EEF1A2	Q05639	463 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	C2orf54	Q08AI8	447 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	CDC16	Q13042	620 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	THOC5	Q13769	683 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	PPP1R7	Q15435	360 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	TUBB8	Q3ZCM7	444 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	RNF187	Q5TA31	235 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	AGAP7P	Q5VUJ5	663 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	YOD1	Q5VVQ6	348 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	CYHR1	Q6ZMK1	362 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	PIWIL4	Q7Z3Z4	852 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	ATG4D	Q86TL0	474 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	PAQR7	Q86WK9	346 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	LURAP1L	Q8IV03	231 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	CPNE9	Q8IYJ1	553 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	RAB42	Q8N4Z0	105 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	CSNK1A1L	Q8N752	337 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MAGEC3	Q8TD91	643 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	ASB11	Q8WXH4	323 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	TM9SF4	Q92544	642 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MIEF2	Q96C03	454 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MMAB	Q96EY8	250 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	AGAP4	Q96P64	663 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	GPR21	Q99679	349 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	ZFYVE21	Q9BQ24	234 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	WDR77	Q9BQA1	342 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	PLCD4	Q9BRC7	762 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	LHPP	Q9H008	270 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	DDX47	Q9H0S4	455 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	RAB17	Q9H0T7	212 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MRPS30	Q9NP92	439 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	SEMA3G	Q9NS98	782 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	C20orf96	Q9NUD7	363 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	SPATA7	Q9P0W8	599 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	ZNF282	Q9UDV7	671 aa	Predicted RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	RUVBL1	Q9Y265	456 aa	Known RBP	6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	NEU2	Q9Y3R4	380 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	MAD1L1	Q9Y6D9	718 aa		6.64	□□□□□ -1.35
MARK3-215	ENST00000558787	FAM237B	A0A1B0GVD1	139 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	IDS	B3KWA1	339 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787		H7BY64	318 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	AP3B1	O00203	1094 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	HAT1	O14929	419 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	PFDN6	O15212	129 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	FOXS1	O43638	330 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	BANF1	O75531	89 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	FKBP9	O95302	570 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	LDLR	P01130	860 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	CAT	P04040	527 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	HEXB	P07686	556 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	COX6A1	P12074	109 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	PAM	P19021	973 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	ATP5D	P30049	168 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	ST13	P50502	369 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	EMP2	P54851	167 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	ADAR	P55265	1226 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	SARNP	P82979	210 aa	Known RBP	6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	TIAL1	Q01085	375 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	CACNA1D	Q01668	2161 aa		6.63	□□□□□ -1.35
MARK3-215	ENST00000558787	PRDX1	Q06830	199 aa	Known RBP	6.63	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms