RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CD38P28907 300 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PEBP1P30086 187 aaKnown RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 KIR3DL1P43629 444 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 GZMMP51124 257 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 TCEA2Q15560 299 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 LRRC36Q1X8D7 754 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 DPY19L1Q2PZI1 675 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ZNF551Q7Z340 670 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 GPR155Q7Z3F1 870 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 COMMD6Q7Z4G1 85 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 CAMKMTQ7Z624 323 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 C11orf74Q86VG3 221 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PDSS2Q86YH6 399 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 SPPL2CQ8IUH8 684 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 TMEM126BQ8IUX1 230 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ADGRG5Q8IZF4 528 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 METTL4Q8N3J2 472 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 DTWD1Q8N5C7 304 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ZBTB44Q8NCP5 570 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 OR52E1Q8NGJ3 308 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 OR2A1Q8NGT9 310 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 OR2L8Q8NGY9 312 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 WDR48Q8TAF3 677 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 TSACCQ96A04 125 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 MIEF2Q96C03 454 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 AURKBQ96GD4 344 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ECSITQ9BQ95 431 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 MCM8Q9UJA3 840 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PCOLCE2Q9UKZ9 415 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 AP4S1Q9Y587 144 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PDZK1P1A8MUH7 402 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 TNFRSF10CO14798 259 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PEX1O43933 1283 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ERN1O75460 977 aaKnown RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 WNT1P04628 370 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ANXA4P09525 319 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 LAMP1P11279 417 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PIM1P11309 404 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 YPEL5P62699 121 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 RACK1P63244 317 aaKnown RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 SLC14A1Q13336 389 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 SIM2Q14190 667 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 LPAL2Q16609 132 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 HMBOX1Q6NT76 420 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ABRAXAS1Q6UWZ7 409 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 WASH2PQ6VEQ5 465 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 RD3Q7Z3Z2 195 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 GPR180Q86V85 440 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 CALHM3Q86XJ0 350 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 GOLM1Q8NBJ4 401 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 DNASE2BQ8WZ79 361 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 KLHDC7BQ96G42 594 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 CCDC115Q96NT0 180 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 TWSG1Q9GZX9 223 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 PCBD2Q9H0N5 130 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 MVB12BQ9H7P6 319 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 KAT8Q9H7Z6 458 aaKnown RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 GPR27Q9NS67 375 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 CCM2LQ9NUG4 571 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 ARMC1Q9NVT9 282 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 TNRC6BQ9UPQ9 1833 aaKnown RBP12.4□□□□□ -0.42
SMAD3-207ENST00000558763 SAP18O00422 153 aaKnown RBP12.4□□□□□ -0.42
SMAD3-207ENST00000558763 PCDH7O60245 1069 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 CNR2P34972 360 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 AQP4P55087 323 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 CSNK1G2P78368 415 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 HIST2H2ACQ16777 129 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-207ENST00000558763 HKDC1Q2TB90 917 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 PGS1Q32NB8 556 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 HIST2H2AA3Q6FI13 130 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 ANKRD26P1Q6NSI1 321 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 NRROSQ86YC3 692 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 DNAJB8Q8NHS0 232 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 C1orf216Q8TAB5 229 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 UBE2E3Q969T4 207 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 ITCHQ96J02 903 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 MS4A8Q9BY19 250 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 KLHL4Q9C0H6 718 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 TMEM168Q9H0V1 697 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 PIF1Q9H611 641 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 TMEM74BQ9NUR3 256 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 PCDHGA2Q9Y5H1 932 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 R4GN57 208 aa12.4□□□□□ -0.42
SMAD3-207ENST00000558763 A0A1W2PR77 199 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 DHRS12A0PJE2 317 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 FEZF1A0PJY2 475 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 GABRR3A8MPY1 467 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 H7BY64 318 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 GBAP04062 536 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 GSNP06396 782 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 RPSAP08865 295 aaKnown RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SOX11P35716 441 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 ASMTP46597 345 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 CSNK1EP49674 416 aaKnown RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SRSF11Q05519 484 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms