RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SH3BP5O60239 455 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 KLHL41O60662 606 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 RASSF9O75901 435 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 MYO1DO94832 1006 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 TGFB1P01137 390 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 PVRP15151 417 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 NCF2P19878 526 aaPredicted RBP14.21□□□□□ -0.13
VPS18-202ENST00000558474 MLLT3P42568 568 aaPredicted RBP14.21□□□□□ -0.13
VPS18-202ENST00000558474 STX1BP61266 288 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 ACSM2AQ08AH3 577 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 TBL3Q12788 808 aaKnown RBP14.21□□□□□ -0.13
VPS18-202ENST00000558474 SQLEQ14534 574 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 GALNTL6Q49A17 601 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 RFTN2Q52LD8 501 aaPredicted RBP14.21□□□□□ -0.13
VPS18-202ENST00000558474 TCTE1Q5JU00 501 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 ACSM2BQ68CK6 577 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 TRPM8Q7Z2W7 1104 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 PAGE2Q7Z2X7 111 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 VN1R4Q7Z5H5 301 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 PIP4P1Q86T03 277 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 MTDHQ86UE4 582 aaKnown RBP14.21□□□□□ -0.13
VPS18-202ENST00000558474 ALYREFQ86V81 257 aaKnown RBP14.21□□□□□ -0.13
VPS18-202ENST00000558474 D2HGDHQ8N465 521 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 RGMAQ96B86 450 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 PPM1MQ96MI6 270 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 ZNF285Q96NJ3 590 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 HBEGFQ99075 208 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 BRINP2Q9C0B6 783 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 ROGDIQ9GZN7 287 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 ZNF385DQ9H6B1 395 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 SAR1AQ9NR31 198 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 RXFP3Q9NSD7 469 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 AIG1Q9NVV5 245 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 PLCL2Q9UPR0 1127 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 MAPRE3Q9UPY8 281 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 WBP11Q9Y2W2 641 aaKnown RBP14.21□□□□□ -0.13
VPS18-202ENST00000558474 PCDHGA1Q9Y5H4 931 aa14.21□□□□□ -0.13
VPS18-202ENST00000558474 A0A0J9YVX5 310 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 EBAG9O00559 213 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 FCHO1O14526 889 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 NDUFS4O43181 175 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 KIF1CO43896 1103 aaKnown RBP14.2□□□□□ -0.14
VPS18-202ENST00000558474 TBX6O95947 436 aaPredicted RBP14.2□□□□□ -0.14
VPS18-202ENST00000558474 THRAP10827 490 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 NELFEP18615 380 aaKnown RBP14.2□□□□□ -0.14
VPS18-202ENST00000558474 GABRA4P48169 554 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 ARL4DP49703 201 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 ACADVLP49748 655 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 EMP3P54852 163 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 CYP4F3Q08477 520 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 HYAL2Q12891 473 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 PDCD4Q53EL6 469 aaKnown RBP14.2□□□□□ -0.14
VPS18-202ENST00000558474 STPG1Q5TH74 334 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 ADNP2Q6IQ32 1131 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 NIPAL1Q6NVV3 410 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 CYB5D1Q6P9G0 228 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 C6orf89Q6UWU4 347 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 USP53Q70EK8 1073 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 ARHGAP22Q7Z5H3 698 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 GLRX5Q86SX6 157 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 PLD3Q8IV08 490 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 MCATQ8IVS2 390 aaKnown RBP14.2□□□□□ -0.14
VPS18-202ENST00000558474 OR2L5Q8NG80 312 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 GAL3ST3Q96A11 431 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 NUDT22Q9BRQ3 303 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 TUBB6Q9BUF5 446 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 NMUR2Q9GZQ4 415 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 REXO4Q9GZR2 422 aaKnown RBP14.2□□□□□ -0.14
VPS18-202ENST00000558474 OR51B5Q9H339 312 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 PRM3Q9NNZ6 103 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 SDR39U1Q9NRG7 319 aaPredicted RBP14.2□□□□□ -0.14
VPS18-202ENST00000558474 SOHLH2Q9NX45 425 aa14.2□□□□□ -0.14
VPS18-202ENST00000558474 A0A088AWK7 358 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 D6RAR5 112 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 H0YGG7 62 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 TMX2-CTNND1H3BSU7 103 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 NRP2O60462 931 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 ETHE1O95571 254 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 ALDOCP09972 364 aaKnown RBP14.19□□□□□ -0.14
VPS18-202ENST00000558474 HOXB3P14651 431 aaPredicted RBP14.19□□□□□ -0.14
VPS18-202ENST00000558474 ZNF10P21506 573 aaPredicted RBP14.19□□□□□ -0.14
VPS18-202ENST00000558474 RAP1GDS1P52306 607 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 ARF3P61204 181 aaPredicted RBP14.19□□□□□ -0.14
VPS18-202ENST00000558474 RPL38P63173 70 aaKnown RBP14.19□□□□□ -0.14
VPS18-202ENST00000558474 CYP4F2P78329 520 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 SPIDRQ14159 915 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 GARNL3Q5VVW2 1013 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 IL23RQ5VWK5 629 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 FAM219BQ5XKK7 198 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 NOXRED1Q6NXP6 359 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 TRIM40Q6P9F5 258 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 ZNF574Q6ZN55 896 aaPredicted RBP14.19□□□□□ -0.14
VPS18-202ENST00000558474 CLNKQ7Z7G1 428 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 MIER2Q8N344 545 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 RNF175Q8N4F7 328 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 MS4A6EQ96DS6 147 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 APIPQ96GX9 242 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 KCNC2Q96PR1 638 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 TBCDQ9BTW9 1192 aa14.19□□□□□ -0.14
VPS18-202ENST00000558474 CCDC106Q9BWC9 280 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms