RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MACC1Q6ZN28 852 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 C11orf57Q6ZUT1 292 aaPredicted RBP2.74□□□□□ -1.97
SPG11-206ENST00000558093 KRT74Q7RTS7 529 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 ADCK2Q7Z695 626 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 ANKRD23Q86SG2 305 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 CROCCP3Q8IVE0 287 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 OR4N5Q8IXE1 308 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 IQUBQ8NA54 791 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 GRK7Q8WTQ7 553 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 CCDC47Q96A33 483 aaKnown RBP2.74□□□□□ -1.97
SPG11-206ENST00000558093 NEDD4LQ96PU5 975 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 ATF6BQ99941 703 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 PARLQ9H300 379 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 TUBB1Q9H4B7 451 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 C3orf14Q9HBI5 128 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 EXOC1Q9NV70 894 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 NKIRAS2Q9NYR9 191 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 GTSE1Q9NYZ3 720 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 PILRBQ9UKJ0 227 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 PLCL2Q9UPR0 1127 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 HCFC1P51610 2035 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 RNF123Q5XPI4 1314 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 hCG_38984A0A1B0GV85 526 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 A0A1W2PRQ8 180 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 MTMR11A4FU01 709 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 E5RGE8 158 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 RTCAO00442 366 aaKnown RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 HMMRO75330 724 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 SAP30O75446 220 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 SRSF10O75494 262 aaKnown RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 PENKP01210 267 aaPredicted RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 DNTTP04053 509 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 RPN1P04843 607 aaKnown RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 HSP90AB1P08238 724 aaKnown RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 ITIH1P19827 911 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 HOXC13P31276 330 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 GPR183P32249 361 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 NDST2P52849 883 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 OR1D5P58170 312 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 NUCB1Q02818 461 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 SLC25A30Q5SVS4 291 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 MOXD1Q6UVY6 613 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 C16orf54Q6UWD8 224 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 CPEB2Q7Z5Q1 589 aaKnown RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 NRARPQ7Z6K4 114 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 CATSPER3Q86XQ3 398 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 EGFL6Q8IUX8 553 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 CNDP2Q96KP4 475 aaKnown RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 IL12RB2Q99665 862 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 ZNF577Q9BSK1 485 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 UBAC1Q9BSL1 405 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 NAA11Q9BSU3 229 aaPredicted RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 DNAI2Q9GZS0 605 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 ANKRD2Q9GZV1 360 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 FAM120CQ9NX05 1096 aaKnown RBP2.73□□□□□ -1.97
SPG11-206ENST00000558093 FBXL4Q9UKA2 621 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 POMT2Q9UKY4 750 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 NSG2Q9Y328 171 aa2.73□□□□□ -1.97
SPG11-206ENST00000558093 IGLV4-3A0A075B6K6 122 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 A0A1W2PPR1 153 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 A8MXE2 369 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 SHISA9B4DS77 424 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 TRAFD1O14545 582 aaPredicted RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 OGTO15294 1046 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 SNAP91O60641 907 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 MTRF1O75570 445 aaKnown RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 NXPH4O95158 308 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 HPP00738 406 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 HOXD4P09016 255 aaPredicted RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 ADORA3P0DMS8 318 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 FDPSP14324 419 aaKnown RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 MYOGP15173 224 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 C4BPBP20851 252 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 PSMA3P25788 255 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 GIFP27352 417 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 CDC25CP30307 473 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 PKLRP30613 574 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 RGS7P49802 495 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 LIMK2P53671 638 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 ERVK-16P61578 105 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 FKBP3Q00688 224 aaKnown RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 IL10RBQ08334 325 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 FAM174BQ3ZCQ3 159 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 CCDC186Q7Z3E2 898 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 SNX32Q86XE0 403 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 HPS6Q86YV9 775 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 FAM219AQ8IW50 185 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 SLC22A15Q8IZD6 547 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 CCAR2Q8N163 923 aaKnown RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 PRSS35Q8N3Z0 413 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 CCDC191Q8NCU4 936 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 OR9Q2Q8NGE9 314 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 KIF18AQ8NI77 898 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 SPPL2AQ8TCT8 520 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 CASP10Q92851 521 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 P2RX5Q93086 422 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 NXPE2Q96DL1 559 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 TRIM44Q96DX7 344 aaPredicted RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 RBM41Q96IZ5 413 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms