RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NAT8LQ8N9F0 302 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 OR4K1Q8NGD4 311 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 MAGOHBQ96A72 148 aaKnown RBP15□□□□□ -0.01
SCFD1-224ENST00000557713 PEX11GQ96HA9 241 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 LURAP1Q96LR2 239 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 OR1F2PQ96R84 312 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 LPAR4Q99677 370 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 SARGQ9BW04 601 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 IARS2Q9NSE4 1012 aaKnown RBP15□□□□□ -0.01
SCFD1-224ENST00000557713 TRMT6Q9UJA5 497 aaKnown RBP15□□□□□ -0.01
SCFD1-224ENST00000557713 MAD1L1Q9Y6D9 718 aa15□□□□□ -0.01
SCFD1-224ENST00000557713 GABRR3A8MPY1 467 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 FAM227AF5H4B4 570 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 DNAJB6O75190 326 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 NEURL1O76050 574 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 MLYCDO95822 493 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 SP1P08047 785 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 SLC35G6P0C7Q6 338 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 ESRRAP11474 423 aaPredicted RBP14.99□□□□□ -0.01
SCFD1-224ENST00000557713 CD46P15529 392 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 GABRB3P28472 473 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 GRK3P35626 688 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 SMSP52788 366 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 SLC26A5P58743 744 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 SP140Q13342 867 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 CDSNQ15517 529 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 PHKG1Q16816 387 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 PAQR3Q6TCH7 311 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 ZNF295-AS1Q8N0V1 137 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 LGI4Q8N135 537 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 SLC5A8Q8N695 610 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 TMEM178AQ8NBL3 297 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCFD1-224ENST00000557713 C2CD4AQ8NCU7 369 aaPredicted RBP14.99□□□□□ -0.01
SCFD1-224ENST00000557713 ABHD11Q8NFV4 315 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 OR5T3Q8NGG3 340 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 ELP5Q8TE02 316 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 TSLPQ969D9 159 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 FRMD6Q96NE9 622 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 NDNQ99608 321 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 FAM167BQ9BTA0 163 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 TRIM8Q9BZR9 551 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 TSPAN10Q9H1Z9 355 aaPredicted RBP14.99□□□□□ -0.01
SCFD1-224ENST00000557713 CDCP1Q9H5V8 836 aa14.99□□□□□ -0.01
SCFD1-224ENST00000557713 ZNF860A6NHJ4 632 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 NPIPA5E9PKD4 350 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 C19orf84I3L1E1 186 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 CDK2AP1O14519 115 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 ASNA1O43681 348 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 GALR3O60755 368 aaPredicted RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 CDC123O75794 336 aaPredicted RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 RGS4P49798 205 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 CDKN2DP55273 166 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 OR4D2P58180 307 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 DHX9Q08211 1270 aaKnown RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 PWP1Q13610 501 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 HERC3Q15034 1050 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 CYP1B1Q16678 543 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 ZNF468Q5VIY5 522 aaPredicted RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 SLC25A25Q6KCM7 469 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 CCDC137Q6PK04 289 aaKnown RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 GALNTL5Q7Z4T8 443 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 RPS19BP1Q86WX3 136 aaKnown RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 CHERPQ8IWX8 916 aaKnown RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 PALM2Q8IXS6 379 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 ZNF740Q8NDX6 193 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 ALKBH8Q96BT7 664 aaKnown RBP14.98□□□□□ -0.01
SCFD1-224ENST00000557713 MS4A14Q96JA4 679 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 MAGED4Q96JG8 741 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 HAUS8Q9BT25 410 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 RBCK1Q9BYM8 510 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 TAS2R13Q9NYV9 303 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 NPIPA1Q9UND3 350 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 MEMO1Q9Y316 297 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 SCN3AQ9NY46 2000 aa14.98□□□□□ -0.01
SCFD1-224ENST00000557713 DCHS2Q6V1P9 2916 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 NDC80O14777 642 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 CHST10O43529 356 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 OR1F1O43749 312 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 CLDN14O95500 239 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 TSPAN12O95859 305 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 AHSGP02765 367 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 FHP07954 510 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 HIST1H2AGP0C0S8 130 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-224ENST00000557713 ALOX12P18054 663 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 HIST1H2ADP20671 130 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 CCR8P51685 355 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 TAS2R50P59544 299 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 MEF2AQ02078 507 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-224ENST00000557713 OC90Q02509 493 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-224ENST00000557713 RBM20Q5T481 1227 aaKnown RBP14.97□□□□□ -0.01
SCFD1-224ENST00000557713 DUPD1Q68J44 220 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 ZNF227Q86WZ6 799 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 MYO1HQ8N1T3 1032 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 HORMAD2Q8N7B1 307 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 OR56A3Q8NH54 315 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 TBC1D20Q96BZ9 403 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 PYCR2Q96C36 320 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 MTFMTQ96DP5 389 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms