RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 H0YIG0 161 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 H3BMH7 237 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 I3L1I5 382 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 K7EPI3 171 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 UBXN8O00124 270 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 NDUFS4O43181 175 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 NRP2O60462 931 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 WISP3O95389 354 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 ALDOAP04075 364 aaKnown RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 TUBBP07437 444 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 HEXBP07686 556 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 CTSBP07858 339 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 UQCRHP07919 91 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 FAM153BP0C7A2 387 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 EPB42P16452 691 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 KRT15P19012 456 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 GGT5P36269 586 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 BCL6P41182 706 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 SLC6A12P48065 614 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 POLE2P56282 527 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 REEP5Q00765 189 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 MEF2AQ02078 507 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 TGM3Q08188 693 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 IFFO1Q0D2I5 559 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 KCNAB2Q13303 367 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 PWP1Q13610 501 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 OR4D1Q15615 310 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 PFKFB4Q16877 469 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 FAM153CQ494X1 144 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 TBCELQ5QJ74 424 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 MFSD4BQ5TF39 518 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 ZNF385CQ66K41 422 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 ATG9BQ674R7 924 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 LCN10Q6JVE6 187 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 TMIGD1Q6UXZ0 262 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 MED25Q71SY5 747 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 ISCA2Q86U28 154 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 LCA5Q86VQ0 697 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 MYLK4Q86YV6 388 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 GSPT2Q8IYD1 628 aaKnown RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 KLHDC8AQ8IYD2 350 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 TMEM102Q8N9M5 508 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 CLEC1AQ8NC01 280 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 OR4K1Q8NGD4 311 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 ZCCHC10Q8TBK6 192 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 DCAKDQ8WVC6 231 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 METTL21AQ8WXB1 218 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 TTC9Q92623 222 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 ATP6V1E2Q96A05 226 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 PTCD3Q96EY7 689 aaKnown RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 OR4K3Q96R72 315 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 RUFY1Q96T51 708 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 CENPKQ9BS16 269 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 CRB3Q9BUF7 120 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 SLC26A1Q9H2B4 701 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 EHD1Q9H4M9 534 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 SEMA3GQ9NS98 782 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 IGSF5Q9NSI5 407 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 GEMIN8Q9NWZ8 242 aaKnown RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 FETUBQ9UGM5 382 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 TUBD1Q9UJT1 453 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 PTBP2Q9UKA9 531 aaKnown RBP7.92□□□□□ -1.14
PSEN1-223ENST00000557511 SDK2Q58EX2 2172 aa7.92□□□□□ -1.14
PSEN1-223ENST00000557511 AHCTF1Q8WYP5 2266 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 PKD1L2Q7Z442 2459 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 PSMD12O00232 456 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 MAP2K7O14733 419 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 PCDH17O14917 1159 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 LCMT2O60294 686 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 NSA2O95478 260 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ONECUT2O95948 504 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 STATHP02808 62 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ALOX12P18054 663 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 IL10P22301 178 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 SERPINB1P30740 379 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 GDF5P43026 501 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 CCL11P51671 97 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 EMP2P54851 167 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ALDH18A1P54886 795 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 IRF9Q00978 393 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 C19orf57Q0VDD7 668 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 DLG1Q12959 904 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 CHIT1Q13231 466 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 LY6DQ14210 128 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 RCN2Q14257 317 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 SLBPQ14493 270 aaKnown RBP eCLIP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 NKG7Q16617 165 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ATP1A1-AS1Q5TC04 95 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 METTL2BQ6P1Q9 378 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 PRSS58Q8IYP2 241 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 CENPLQ8N0S6 344 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 TEX9Q8N6V9 391 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 LRRN4CLQ8ND94 238 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 SRFBP1Q8NEF9 429 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 C9orf43Q8TAL5 461 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 STT3BQ8TCJ2 826 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ACMSDQ8TDX5 336 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 PPP4R1Q8TF05 950 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ESAMQ96AP7 390 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms