RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MYH7P12883 1935 aa3.29□□□□□ -1.88
VRK1-207ENST00000557352 BCL9O00512 1426 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 KDM6AO15550 1401 aaPredicted RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 TNS2Q63HR2 1409 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 JCADQ9P266 1359 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 QSER1Q2KHR3 1735 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 PCDH11XQ9BZA7 1347 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 A0A087WUV0 522 aaPredicted RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 HMGB1P1B2RPK0 211 aaPredicted RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 ARPC2O15144 300 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 IPO8O15397 1037 aaKnown RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 DOK2O60496 412 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 BAIAP3O94812 1187 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 PRKAR1AP10644 381 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 GP1BBP13224 206 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 DNASE1P24855 282 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 GCH1P30793 250 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 ETV5P41161 510 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 GEMIN4P57678 1058 aaKnown RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 IRX4P78413 519 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 MC1RQ01726 317 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 MAPRE1Q15691 268 aaKnown RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 RNF212Q495C1 297 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 SZRD1Q7Z422 152 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 LGI2Q8N0V4 545 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 MCUQ8NE86 351 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 NPRL2Q8WTW4 380 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 THOC1Q96FV9 657 aaKnown RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 TIGD1Q96MW7 591 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 MAP3K3Q99759 626 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 NYXQ9GZU5 481 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 CHMP4BQ9H444 224 aaKnown RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 HEXA-AS1Q9H8Q6 139 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 SLC35C2Q9NQQ7 365 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 THAP10Q9P2Z0 257 aaPredicted RBP3.28□□□□□ -1.88
VRK1-207ENST00000557352 R4GN57 208 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 KCPQ6ZWJ8 1503 aa3.28□□□□□ -1.88
VRK1-207ENST00000557352 RGS12O14924 1447 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 ABCC4O15439 1325 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 UBR3Q6ZT12 1888 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 LOC100509620A0A075B734 347 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 O00370 1275 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 ZBED4O75132 1171 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 POP4O95707 220 aaKnown RBP3.27□□□□□ -1.89
VRK1-207ENST00000557352 GP9P14770 177 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 MPZP25189 248 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 OXTRP30559 389 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 PTGER4P35408 488 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 MTHFRP42898 656 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 CREB5Q02930 508 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 KLC1Q07866 573 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 TMEM132DQ14C87 1099 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 PCLAFQ15004 111 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 TAF7Q15545 349 aaPredicted RBP3.27□□□□□ -1.89
VRK1-207ENST00000557352 C1orf141Q5JVX7 400 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 ZNF841Q6ZN19 808 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 NUP54Q7Z3B4 507 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 SLC25A42Q86VD7 318 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 FAM131BQ86XD5 332 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 OR7A2PQ8NGA2 310 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 C9orf43Q8TAL5 461 aaPredicted RBP3.27□□□□□ -1.89
VRK1-207ENST00000557352 SPACA9Q96E40 222 aaPredicted RBP3.27□□□□□ -1.89
VRK1-207ENST00000557352 C1orf147Q96MC9 270 aaPredicted RBP3.27□□□□□ -1.89
VRK1-207ENST00000557352 PANK2Q9BZ23 570 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 PARLQ9H300 379 aa3.27□□□□□ -1.89
VRK1-207ENST00000557352 ABT1Q9ULW3 272 aaKnown RBP3.27□□□□□ -1.89
VRK1-207ENST00000557352 A0A1B0GUL6 1792 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 IGHV4-30-2A0A087WSY4 118 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 NEMP2A6NFY4 417 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 SHISA9B4DS77 424 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 SNAP91O60641 907 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 KRT33AO76009 404 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 MELTFP08582 738 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 PRG2P13727 222 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 DNA2P51530 1060 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 CLCN4P51793 760 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 CLNS1AP54105 237 aaKnown RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 HNRNPKP61978 463 aaKnown RBP eCLIP3.26□□□□□ -1.89
VRK1-207ENST00000557352 TRA2BP62995 288 aaKnown RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 MYL7Q01449 175 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 PTPN14Q15678 1187 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 FAM189A2Q15884 450 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 PHKG1Q16816 387 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 C15orf59Q2T9L4 293 aaPredicted RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 TWISTNBQ3B726 338 aaPredicted RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 ZNF530Q6P9A1 599 aaPredicted RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 LCLAT1Q6UWP7 414 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 MCM10Q7L590 875 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 CHMP1BQ7LBR1 199 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 ZER1Q7Z7L7 766 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 C17orf53Q8N3J3 647 aaPredicted RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 OR5T2Q8NGG2 359 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 C2orf48Q96LS8 159 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 CHCHD6Q9BRQ6 235 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 API5Q9BZZ5 524 aaKnown RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 GPN1Q9HCN4 374 aaPredicted RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 DDX19BQ9UMR2 479 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 PA2G4Q9UQ80 394 aaKnown RBP3.26□□□□□ -1.89
VRK1-207ENST00000557352 C4AP0C0L4 1744 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms