RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SERPINB12Q96P63 405 aa13.9□□□□□ -0.18
CHD8-211ENST00000556833 AARSD1Q9BTE6 412 aaKnown RBP13.9□□□□□ -0.18
CHD8-211ENST00000556833 SLC17A6Q9P2U8 582 aa13.9□□□□□ -0.18
CHD8-211ENST00000556833 FBXO5Q9UKT4 447 aa13.9□□□□□ -0.18
CHD8-211ENST00000556833 MED13LQ71F56 2210 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 SDR42E2A6NKP2 422 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 NDC80O14777 642 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 NDUFS4O43181 175 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 BANF1O75531 89 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 HNF4AP41235 474 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 AGTR2P50052 363 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 SMSP52788 366 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 SLC26A5P58743 744 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 EXT1Q16394 746 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 PHKG1Q16816 387 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.89□□□□□ -0.19
CHD8-211ENST00000556833 DEFB134Q4QY38 66 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 RNFT1Q5M7Z0 435 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 RBM20Q5T481 1227 aaKnown RBP13.89□□□□□ -0.19
CHD8-211ENST00000556833 H3F3CQ6NXT2 135 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 XKRXQ6PP77 449 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 SLC5A8Q8N695 610 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 ZNF740Q8NDX6 193 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 M1APQ8TC57 530 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 AGAP11Q8TF27 550 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 MAIP1Q8WWC4 291 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 MTFMTQ96DP5 389 aaKnown RBP13.89□□□□□ -0.19
CHD8-211ENST00000556833 SCMH1Q96GD3 660 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 MS4A14Q96JA4 679 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 LPAR4Q99677 370 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 RHBGQ9H310 441 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 LANCL2Q9NS86 450 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 LRFN1Q9P244 771 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 ZKSCAN5Q9Y2L8 839 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 MEMO1Q9Y316 297 aa13.89□□□□□ -0.19
CHD8-211ENST00000556833 SETD2Q9BYW2 2564 aaPredicted RBP13.88□□□□□ -0.19
CHD8-211ENST00000556833 OR1F1O43749 312 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 SLC25A12O75746 678 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 NEURL1O76050 574 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 CLDN14O95500 239 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 SP1P08047 785 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 SLC35G6P0C7Q6 338 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 ZNF888P0CJ79 500 aaPredicted RBP13.88□□□□□ -0.19
CHD8-211ENST00000556833 TPP2P29144 1249 aaPredicted RBP13.88□□□□□ -0.19
CHD8-211ENST00000556833 PTGER1P34995 402 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 CDKN2DP55273 166 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 TAS2R50P59544 299 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 BTG2P78543 158 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 TIAL1Q01085 375 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHD8-211ENST00000556833 RELAQ04206 551 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 HYAL2Q12891 473 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 PAQR3Q6TCH7 311 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 CEP97Q8IW35 865 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 TMEM178AQ8NBL3 297 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 MFSD9Q8NBP5 474 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 THAP3Q8WTV1 239 aaPredicted RBP13.88□□□□□ -0.19
CHD8-211ENST00000556833 TM4SF19Q96DZ7 209 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 LINGO1Q96FE5 620 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 TSNARE1Q96NA8 513 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 SPNS1Q9H2V7 528 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 MMP25Q9NPA2 562 aa13.88□□□□□ -0.19
CHD8-211ENST00000556833 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.87□□□□□ -0.19
CHD8-211ENST00000556833 KCNE1BA0A087WTH5 132 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 CTAGE15A4D2H0 777 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 CHST10O43529 356 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 ASNA1O43681 348 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 CDC40O60508 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHD8-211ENST00000556833 GUCA1CO95843 209 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 FHP07954 510 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 ZNF24P17028 368 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 MAOAP21397 527 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 CDC25BP30305 580 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 GRK3P35626 688 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 CATSPEREQ5SY80 951 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 SLC25A25Q6KCM7 469 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 CTAGE6Q86UF2 777 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 SIAH3Q8IW03 269 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 PALM2Q8IXS6 379 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 MYO1HQ8N1T3 1032 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 FAM98AQ8NCA5 519 aaKnown RBP13.87□□□□□ -0.19
CHD8-211ENST00000556833 MAGOHBQ96A72 148 aaKnown RBP13.87□□□□□ -0.19
CHD8-211ENST00000556833 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 TRIM51Q9BSJ1 452 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 PARVBQ9HBI1 364 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 GPAMQ9HCL2 828 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 ZNF835Q9Y2P0 537 aa13.87□□□□□ -0.19
CHD8-211ENST00000556833 ASPDHA6ND91 283 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 MAGEB17A8MXT2 336 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 GOLGA6L6A8MZA4 724 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 HRH2P25021 359 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 MAGEA6P43360 314 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 RGS4P49798 205 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 ITGA8P53708 1063 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 RAB8AP61006 207 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 DHX9Q08211 1270 aaKnown RBP13.86□□□□□ -0.19
CHD8-211ENST00000556833 LCTLQ6UWM7 567 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 Q6ZPB1 254 aaPredicted RBP13.86□□□□□ -0.19
CHD8-211ENST00000556833 FGD2Q7Z6J4 655 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 RPS19BP1Q86WX3 136 aaKnown RBP13.86□□□□□ -0.19
CHD8-211ENST00000556833 DOLPP1Q86YN1 238 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms