RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 DNAJB5O75953 348 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 KLHL2O95198 593 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 NSA2O95478 260 aaKnown RBP13.38□□□□□ -0.27
SLIRP-207ENST00000556831 ALPPP05187 535 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 HEXBP07686 556 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 ZGLP1P0C6A0 271 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 C1GALT1C1LP0DN25 315 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 IL1RNP18510 177 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 MMP11P24347 488 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 GSTM2P28161 218 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 GGT5P36269 586 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 PGDP52209 483 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 IRF9Q00978 393 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 KLC1Q07866 573 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 SLBPQ14493 270 aaKnown RBP eCLIP13.38□□□□□ -0.27
SLIRP-207ENST00000556831 TSNAXIP1Q2TAA8 658 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 XKR6Q5GH73 641 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 TMEM214Q6NUQ4 689 aaKnown RBP13.38□□□□□ -0.27
SLIRP-207ENST00000556831 COX15Q7KZN9 410 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 PRICKLE2Q7Z3G6 844 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 KLHDC8AQ8IYD2 350 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 SHISA5Q8N114 240 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 EIF1ADQ8N9N8 165 aaKnown RBP13.38□□□□□ -0.27
SLIRP-207ENST00000556831 OR4K1Q8NGD4 311 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 OR9A4Q8NGU2 314 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 RHEBL1Q8TAI7 183 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 NXNL1Q96CM4 212 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 MTBPQ96DY7 904 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 SPSB2Q99619 263 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 TMEM79Q9BSE2 394 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 EFCAB11Q9BUY7 163 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 SARGQ9BW04 601 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 CD244Q9BZW8 370 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 PITHD1Q9GZP4 211 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-207ENST00000556831 P4HTMQ9NXG6 502 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 C3orf18Q9UK00 162 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 RELNP78509 3460 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 SEC16AO15027 2179 aa13.38□□□□□ -0.27
SLIRP-207ENST00000556831 A0A088AWK7 358 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 IQANK1A0A1B0GTG1 560 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ANKDD1BA6NHY2 528 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TRIM49D1C9J1S8 452 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 AGPSO00116 658 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 UBXN8O00124 270 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 MASP2O00187 686 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 PCDH17O14917 1159 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 LCMT2O60294 686 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ALDOAP04075 364 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 UMODP07911 640 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 SNRPAP09012 282 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 RBP1P09455 135 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ACPPP15309 386 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 NR1D1P20393 614 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ZNF10P21506 573 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 VARSP26640 1264 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 GMPRP36959 345 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ARL1P40616 181 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 SCTRP47872 440 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 STXBP1P61764 594 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 IRF8Q02556 426 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 LAPTM5Q13571 262 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 C18orf21Q32NC0 220 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TUBB8Q3ZCM7 444 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 MINDY4Q4G0A6 757 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 FBXO48Q5FWF7 155 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ATG9BQ674R7 924 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TCTN3Q6NUS6 607 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TMIGD1Q6UXZ0 262 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ASB18Q6ZVZ8 466 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 PPP1R32Q7Z5V6 425 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 ISCA2Q86U28 154 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 GSPT2Q8IYD1 628 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 CENPLQ8N0S6 344 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 KCT2Q8NC54 265 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 UBLCP1Q8WVY7 318 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 METTL21AQ8WXB1 218 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TM4SF19Q96DZ7 209 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 PTCD3Q96EY7 689 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 FAR2Q96K12 515 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 MACROD1Q9BQ69 325 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TRIM55Q9BYV6 548 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 GPR83Q9NYM4 423 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 HCN3Q9P1Z3 774 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 CPSF2Q9P2I0 782 aaKnown RBP13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TMCO1Q9UM00 188 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TP53TG5Q9Y2B4 290 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 SLC22A7Q9Y694 548 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 MED13Q9UHV7 2174 aa13.37□□□□□ -0.27
SLIRP-207ENST00000556831 TNRC6AQ8NDV7 1962 aaKnown RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 DOPEY2Q9Y3R5 2298 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 A6NL46 340 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 VSTM2BA6NLU5 285 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 B8ZZF3 427 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 K7EPI3 171 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 SGK494L7N484 410 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 FFAR3O14843 346 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 GPR42O15529 346 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 TAPBPO15533 448 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms