RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 SRFBP1Q8NEF9 429 aaKnown RBP11.94□□□□□ -0.5
ABCD4-225ENST00000556517 OR1L3Q8NH93 324 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 NT5CQ8TCD5 201 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 ZNF473Q8WTR7 871 aaKnown RBP11.94□□□□□ -0.5
ABCD4-225ENST00000556517 SERPINI1Q99574 410 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 CTRCQ99895 268 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 DDA1Q9BW61 102 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 C20orf27Q9GZN8 174 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 REXO4Q9GZR2 422 aaKnown RBP11.94□□□□□ -0.5
ABCD4-225ENST00000556517 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
ABCD4-225ENST00000556517 SLCO1B3Q9NPD5 702 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 TXLNGQ9NUQ3 528 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 RIC8BQ9NVN3 520 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 MARCOQ9UEW3 520 aaPredicted RBP11.94□□□□□ -0.5
ABCD4-225ENST00000556517 DNAJC15Q9Y5T4 150 aa11.94□□□□□ -0.5
ABCD4-225ENST00000556517 GOLGA4Q13439 2230 aaKnown RBP11.94□□□□□ -0.5
ABCD4-225ENST00000556517 HYKKA2RU49 373 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 SLC28A1O00337 649 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 HDAC3O15379 428 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 HCRTR1O43613 425 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 SKAP2O75563 359 aaPredicted RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 TGFB1P01137 390 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 STATHP02808 62 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 TROVE2P10155 538 aaKnown RBP eCLIP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 FGF5P12034 268 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 ITIH1P19827 911 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 SERPINB3P29508 390 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 RBMS1P29558 406 aaKnown RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 GYS2P54840 703 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 EMP3P54852 163 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 RPS13P62277 151 aaKnown RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 GABREP78334 506 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 CUL3Q13618 768 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 ABRAXAS2Q15018 415 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 HERC3Q15034 1050 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 PDCD2Q16342 344 aaPredicted RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 HKDC1Q2TB90 917 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 TOR1AIP1Q5JTV8 583 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 SPDYAQ5MJ70 313 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 TCHHL1Q5QJ38 904 aaPredicted RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 GARNL3Q5VVW2 1013 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 KHDRBS2Q5VWX1 349 aaKnown RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 ADNP2Q6IQ32 1131 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 DGLUCYQ7Z3D6 616 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 BMPERQ8N8U9 685 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 ZCCHC10Q8TBK6 192 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 CREB3L4Q8TEY5 395 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 USP7Q93009 1102 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 TM4SF19Q96DZ7 209 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 C19orf60Q96EN9 201 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 PRR11Q96HE9 360 aaPredicted RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 ZNF285Q96NJ3 590 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 KCNC2Q96PR1 638 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 TAAR9Q96RI9 348 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 HBEGFQ99075 208 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 MS4A8Q9BY19 250 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 ULBP3Q9BZM4 244 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 SPRTNQ9H040 489 aaPredicted RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 NSRP1Q9H0G5 558 aaKnown RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 COPS7BQ9H9Q2 264 aaPredicted RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 POLR1BQ9H9Y6 1135 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 TNFRSF12AQ9NP84 129 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 FARSBQ9NSD9 589 aaKnown RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 STARD5Q9NSY2 213 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 PNPOQ9NVS9 261 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 PSD3Q9NYI0 1048 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 VPS29Q9UBQ0 182 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 PPT2Q9UMR5 302 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 SLC12A4Q9UP95 1085 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 RUVBL1Q9Y265 456 aaKnown RBP11.93□□□□□ -0.5
ABCD4-225ENST00000556517 PCDHGA8Q9Y5G5 932 aa11.93□□□□□ -0.5
ABCD4-225ENST00000556517 FITM1A5D6W6 292 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 LRIT2A6NDA9 550 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 PIP5K1BO14986 540 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 P2RX6O15547 441 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 ZNF749O43361 778 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 ERI3O43414 337 aaKnown RBP11.92□□□□□ -0.5
ABCD4-225ENST00000556517 HYAL3O43820 417 aaPredicted RBP11.92□□□□□ -0.5
ABCD4-225ENST00000556517 EDF1O60869 148 aaKnown RBP11.92□□□□□ -0.5
ABCD4-225ENST00000556517 CPNE3O75131 537 aaKnown RBP11.92□□□□□ -0.5
ABCD4-225ENST00000556517 SEMA3DO95025 777 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 LINC00032P0C843 101 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 HTR6P50406 440 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 GNGT1P63211 74 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 NR6A1Q15406 480 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 PRTGQ2VWP7 1150 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 TMEM214Q6NUQ4 689 aaKnown RBP11.92□□□□□ -0.5
ABCD4-225ENST00000556517 RNF165Q6ZSG1 346 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 TRIM46Q7Z4K8 759 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 VN1R5Q7Z5H4 357 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 KCT2Q8NC54 265 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 OR2L5Q8NG80 312 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 GAL3ST3Q96A11 431 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 RGMAQ96B86 450 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 CLIP3Q96DZ5 547 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 CHMP6Q96FZ7 201 aa11.92□□□□□ -0.5
ABCD4-225ENST00000556517 MACROD1Q9BQ69 325 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms