RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 EMC9Q9Y3B6 208 aa9.5□□□□□ -0.89
SCFD1-220ENST00000556486 CAPN6Q9Y6Q1 641 aa9.5□□□□□ -0.89
SCFD1-220ENST00000556486 FAM169AQ9Y6X4 670 aa9.5□□□□□ -0.89
SCFD1-220ENST00000556486 TRAV17A0A0B4J275 112 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 A0A1W2PPV9 198 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 HYKKA2RU49 373 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 E7EVH7 732 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 AP3B1O00203 1094 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 FFAR3O14843 346 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 CD3EAPO15446 510 aaKnown RBP9.49□□□□□ -0.89
SCFD1-220ENST00000556486 GPR42O15529 346 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 DLX3O60479 287 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 USP1O94782 785 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 MATN4O95460 622 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 CLDN14O95500 239 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 WDPCPO95876 746 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 FTCDO95954 541 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 APRTP07741 180 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 ZGLP1P0C6A0 271 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 DRD2P14416 443 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 CD1EP15812 388 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 CAPN3P20807 821 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 SMSP52788 366 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 CSE1LP55060 971 aaKnown RBP9.49□□□□□ -0.89
SCFD1-220ENST00000556486 KLC1Q07866 573 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 ZNF460Q14592 562 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 ARHGAP19Q14CB8 494 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 TYSND1Q2T9J0 566 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 MUM1Q2TAK8 710 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 PRTGQ2VWP7 1150 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 WASHC2DQ5SRD0 308 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 MTFR2Q6P444 385 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 C4orf22Q6V702 233 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 OTOAQ7RTW8 1153 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 SLC13A5Q86YT5 568 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-220ENST00000556486 RAB42Q8N4Z0 105 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 PPHLN1Q8NEY8 458 aaKnown RBP9.49□□□□□ -0.89
SCFD1-220ENST00000556486 STT3BQ8TCJ2 826 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 MAGEC3Q8TD91 643 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 ADAMTS18Q8TE60 1221 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 PSMF1Q92530 271 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 BIRC8Q96P09 236 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 BAG1Q99933 345 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-220ENST00000556486 CRB3Q9BUF7 120 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 CHRAC1Q9NRG0 131 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 ZNF282Q9UDV7 671 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-220ENST00000556486 ANAPC5Q9UJX4 755 aa9.49□□□□□ -0.89
SCFD1-220ENST00000556486 TTC7AQ9ULT0 858 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-220ENST00000556486 H3BMM5 538 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 MAP2K7O14733 419 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 RASAL1O95294 804 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 MED26O95402 600 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 IFNB1P01574 187 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ESR1P03372 595 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 PRR35P0CG20 571 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 CASP6P55212 293 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 CDK16Q00536 496 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 PTRHD1Q6GMV3 140 aaKnown RBP9.48□□□□□ -0.89
SCFD1-220ENST00000556486 FRMPD2BQ6IN97 320 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 POMZP3Q6PJE2 187 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-220ENST00000556486 UBE3DQ7Z6J8 389 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 LDB1Q86U70 411 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-220ENST00000556486 KBTBD2Q8IY47 623 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 KRT222Q8N1A0 295 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ARHGEF39Q8N4T4 335 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 SVOPQ8N4V2 548 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 CFAP61Q8NHU2 1237 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 GSDMBQ8TAX9 411 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 C14orf79Q96F83 325 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 MAGED4Q96JG8 741 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 C10orf90Q96M02 699 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ZFYVE21Q9BQ24 234 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 KIFC1Q9BW19 673 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 RNF32Q9H0A6 362 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 GP6Q9HCN6 339 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ZNF304Q9HCX3 659 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ZIM2Q9NZV7 527 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ZNF148Q9UQR1 794 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ZKSCAN5Q9Y2L8 839 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 NFS1Q9Y697 457 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 ACANP16112 2415 aa9.48□□□□□ -0.89
SCFD1-220ENST00000556486 LOC102723996A0A087X1L8 192 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 LOC105369274A0A096LPK9 316 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 LOC102723532A0A0G2JNH3 316 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 A0A0U1RQJ8 604 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 MYO1CO00159 1063 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 SHOXO15266 292 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 PRPF4O43172 522 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCFD1-220ENST00000556486 AKAP10O43572 662 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 PSIP1O75475 530 aaKnown RBP9.47□□□□□ -0.89
SCFD1-220ENST00000556486 NDUFS3O75489 264 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 CRYABP02511 175 aaKnown RBP9.47□□□□□ -0.89
SCFD1-220ENST00000556486 SERPINA7P05543 415 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 CYC1P08574 325 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 COX6A1P12074 109 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 PSMB5P28074 263 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 RPL22P35268 128 aaKnown RBP9.47□□□□□ -0.89
SCFD1-220ENST00000556486 HSD17B2P37059 387 aa9.47□□□□□ -0.89
SCFD1-220ENST00000556486 SLC26A3P40879 764 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms