RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 NRDCO43847 1150 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 CRYABP02511 175 aaKnown RBP12.5□□□□□ -0.41
TGFB3-204ENST00000556285 SNRPB2P08579 225 aaKnown RBP12.5□□□□□ -0.41
TGFB3-204ENST00000556285 CA7P43166 264 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 RGS4P49798 205 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 ABRAXAS2Q15018 415 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 CATSPEREQ5SY80 951 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 SPINK14Q6IE38 97 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 PAPD4Q6PIY7 484 aaKnown RBP12.5□□□□□ -0.41
TGFB3-204ENST00000556285 NCCRP1Q6ZVX7 275 aaPredicted RBP12.5□□□□□ -0.41
TGFB3-204ENST00000556285 MYO1HQ8N1T3 1032 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 DNAJB8Q8NHS0 232 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 ZNF354BQ96LW1 612 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 OSBPL9Q96SU4 736 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 OLFM1Q99784 485 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 C19orf25Q9UFG5 118 aaPredicted RBP12.5□□□□□ -0.41
TGFB3-204ENST00000556285 TEKT2Q9UIF3 430 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 SLC22A7Q9Y694 548 aa12.5□□□□□ -0.41
TGFB3-204ENST00000556285 SLC16A5O15375 505 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 CHST10O43529 356 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 OR1F1O43749 312 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 GUCA1CO95843 209 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 SERPIND1P05546 499 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 CYC1P08574 325 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 AGTR2P50052 363 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 AP2B1P63010 937 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 SP140Q13342 867 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 USP10Q14694 798 aaKnown RBP12.49□□□□□ -0.41
TGFB3-204ENST00000556285 OR1C1Q15619 314 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 NSDHLQ15738 373 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 C3AR1Q16581 482 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 BBS9Q3SYG4 887 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 ZNF468Q5VIY5 522 aaPredicted RBP12.49□□□□□ -0.41
TGFB3-204ENST00000556285 UGT3A1Q6NUS8 523 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 TRMT10BQ6PF06 316 aaKnown RBP12.49□□□□□ -0.41
TGFB3-204ENST00000556285 PCGF5Q86SE9 256 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 MRGPRGQ86SM5 289 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 PALM2Q8IXS6 379 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 SLC35F6Q8N357 371 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 AFAP1L2Q8N4X5 818 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 PLPP5Q8NEB5 264 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 ABHD11Q8NFV4 315 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 OR4K1Q8NGD4 311 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 OR56A3Q8NH54 315 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 M1APQ8TC57 530 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 SNF8Q96H20 258 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 WDR83Q9BRX9 315 aaKnown RBP12.49□□□□□ -0.41
TGFB3-204ENST00000556285 MMP25Q9NPA2 562 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 ARL15Q9NXU5 204 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 TINAGQ9UJW2 476 aa12.49□□□□□ -0.41
TGFB3-204ENST00000556285 C4orf51C9J302 202 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 FAM227AF5H4B4 570 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 C19orf84I3L1E1 186 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 DNALI1O14645 258 aaPredicted RBP12.48□□□□□ -0.41
TGFB3-204ENST00000556285 NDUFS4O43181 175 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 GALR3O60755 368 aaPredicted RBP12.48□□□□□ -0.41
TGFB3-204ENST00000556285 SLC19A2O60779 497 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 B4GALT2O60909 372 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 SLC35G6P0C7Q6 338 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 ZNF888P0CJ79 500 aaPredicted RBP12.48□□□□□ -0.41
TGFB3-204ENST00000556285 CCND1P24385 295 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 ELAVL4P26378 380 aaKnown RBP12.48□□□□□ -0.41
TGFB3-204ENST00000556285 IVDP26440 423 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 FNTAP49354 379 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 CCR8P51685 355 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 OR4D2P58180 307 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 SLC26A5P58743 744 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 BTG2P78543 158 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 ADORA2A-AS1P86434 159 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 ACTN3Q08043 901 aaPredicted RBP12.48□□□□□ -0.41
TGFB3-204ENST00000556285 ART3Q13508 389 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 EXT1Q16394 746 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 MEP1AQ16819 746 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 SPANXN3Q5MJ09 141 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 TEDDM1Q5T9Z0 273 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 HECTD2Q5U5R9 776 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 DUPD1Q68J44 220 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 LRRC8EQ6NSJ5 796 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 CNTN4Q8IWV2 1026 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 GPATCH11Q8N954 259 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 ACTRT1Q8TDG2 376 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 NEIL2Q969S2 332 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 CERS2Q96G23 380 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 SCMH1Q96GD3 660 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 TSNARE1Q96NA8 513 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 UTP23Q9BRU9 249 aaKnown RBP12.48□□□□□ -0.41
TGFB3-204ENST00000556285 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
TGFB3-204ENST00000556285 CDCP1Q9H5V8 836 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 ASIC3Q9UHC3 531 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 TACC2O95359 2948 aa12.48□□□□□ -0.41
TGFB3-204ENST00000556285 F8P00451 2351 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 TRBC2A0A5B9 178 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 GABRR3A8MPY1 467 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 MAGEB17A8MXT2 336 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 NPIPA5E9PKD4 350 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms