RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 IL1RNP18510 177 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 GGT1P19440 569 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TACR1P25103 407 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PTX3P26022 381 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PTPN6P29350 595 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 RPL3P39023 403 aaKnown RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 GRIA3P42263 894 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 KIR3DL1P43629 444 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 GTF2A1P52655 376 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 YBX1P67809 324 aaKnown RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 RAE1P78406 368 aaKnown RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PHEXP78562 749 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 KLC1Q07866 573 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SMAD4Q13485 552 aaKnown RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 BLMHQ13867 455 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SLBPQ14493 270 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PON2Q15165 354 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 DUOXA1Q1HG43 343 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 LRIT3Q3SXY7 679 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SFT2D3Q587I9 215 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PRAMEF14Q5SWL7 426 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PRAMEF13Q5VWM6 474 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3GQ6DHY5 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3CQ6IPX1 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 ANO7Q6IWH7 933 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 DOK6Q6PKX4 331 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 WASH2PQ6VEQ5 465 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 ERMP1Q7Z2K6 904 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 GPR180Q86V85 440 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 CALHM3Q86XJ0 350 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 FAM129CQ86XR2 697 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SPPL2CQ8IUH8 684 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 MSRB3Q8IXL7 192 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 ADGRG5Q8IZF4 528 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3Q8IZP1 549 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 KRT78Q8N1N4 520 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 RAB42Q8N4Z0 105 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PACRGLQ8N7B6 248 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 OR4K1Q8NGD4 311 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 OR5AR1Q8NGP9 310 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SIPA1Q96FS4 1042 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 KLHDC7BQ96G42 594 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 MRGPRX1Q96LB2 322 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PPM1MQ96MI6 270 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 MTERF1Q99551 399 aaKnown RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 RAB11FIP5Q9BXF6 653 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 COPS7BQ9H9Q2 264 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 KCNK12Q9HB15 430 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 FAM120CQ9NX05 1096 aaKnown RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SLC25A37Q9NYZ2 338 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 VAPAQ9P0L0 249 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 BTNL2Q9UIR0 455 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PRKAB1Q9Y478 270 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 DTNAQ9Y4J8 743 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 OR1A2Q9Y585 309 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 SHISA7A6NL88 538 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 C2CD4DB7Z1M9 353 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 TNFRSF10CO14798 259 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 DFNA5O60443 496 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 SEMA3DO95025 777 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 SCELO95171 688 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ETHE1O95571 254 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 APBB3O95704 486 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 IGLV3-19P01714 112 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 PDGFAP04085 211 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ANXA4P09525 319 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF26P17031 533 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 IDSP22304 550 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 HRH2P25021 359 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 PSMA4P25789 261 aaKnown RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 TIA1P31483 386 aaKnown RBP eCLIP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 IGFALSP35858 605 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 GZMMP51124 257 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 CCR8P51685 355 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 WNT3P56703 355 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 RPS13P62277 151 aaKnown RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 MRPS35P82673 323 aaKnown RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 CYP4F3Q08477 520 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 UAP1L1Q3KQV9 507 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 SLC44A4Q53GD3 710 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 CATSPEREQ5SY80 951 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ANXA8L1Q5VT79 327 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 GLYATQ6IB77 296 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 PPP4R4Q6NUP7 873 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ABRAXAS1Q6UWZ7 409 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 TMIGD1Q6UXZ0 262 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 CYP2R1Q6VVX0 501 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 EP400NLQ6ZTU2 488 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 TMPRSS11BQ86T26 416 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 SYT12Q8IV01 421 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 METTL4Q8N3J2 472 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 TMEM132CQ8N3T6 1108 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ICA1LQ8NDH6 482 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 VPS37AQ8NEZ2 397 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 CANT1Q8WVQ1 401 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 GATA6Q92908 595 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 BIRC7Q96CA5 298 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 MTERF3Q96E29 417 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms