RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FAM227AF5H4B4 570 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PFDN6O15212 129 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TTI1O43156 1089 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ASNA1O43681 348 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZBTB14O43829 449 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CDC123O75794 336 aaPredicted RBP13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CLDN14O95500 239 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TSPAN12O95859 305 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SP1P08047 785 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CDH1P12830 882 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MLNP12872 115 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 HRH2P25021 359 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CDC25BP30305 580 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CXCR5P32302 372 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PGGT1BP53609 377 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 GPS1Q13098 491 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ABRAXAS2Q15018 415 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 EXT1Q16394 746 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TTLL9Q3SXZ7 439 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 KRTCAP3Q53RY4 240 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MFSD4BQ5TF39 518 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AGTRAPQ6RW13 159 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 GSTA5Q7RTV2 222 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ARMC10Q8N2F6 343 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SPC24Q8NBT2 197 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZNF740Q8NDX6 193 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 OR4K1Q8NGD4 311 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SERPINB12Q96P63 405 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 OR4K3Q96R72 315 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 UTP23Q9BRU9 249 aaKnown RBP13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AICDAQ9GZX7 198 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ENKD1Q9H0I2 346 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ATG10Q9H0Y0 220 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TRIM45Q9H8W5 580 aaPredicted RBP13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NPIPA1Q9UND3 350 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 DNAJC13O75165 2243 aa13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MAP1AP78559 2803 aaPredicted RBP13.48□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 C4orf51C9J302 202 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 EIF3FO00303 357 aaPredicted RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PAMP19021 973 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 EEF1DP29692 281 aaKnown RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NR0B1P51843 470 aaKnown RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ALDH6A1Q02252 535 aaKnown RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NAE1Q13564 534 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NSDHLQ15738 373 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SLC25A25Q6KCM7 469 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CAPN13Q6MZZ7 669 aaPredicted RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CASC4Q6P4E1 433 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 LCTLQ6UWM7 567 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 C3P1Q6ZMU1 363 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ZNF662Q6ZS27 426 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ASPGQ86U10 573 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 LGI4Q8N135 537 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CPSF7Q8N684 471 aaKnown RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MFSD9Q8NBP5 474 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CAMKVQ8NCB2 501 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MCUQ8NE86 351 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NFAM1Q8NET5 270 aaPredicted RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ABHD11Q8NFV4 315 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 AGAP11Q8TF27 550 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SLC13A3Q8WWT9 602 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 OR1F2PQ96R84 312 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CDCP1Q9H5V8 836 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PLAC1Q9HBJ0 212 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ANKHQ9HCJ1 492 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 FBXO5Q9UKT4 447 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 ITPR3Q14573 2671 aa13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PHF3Q92576 2039 aaKnown RBP13.47□□□□□ -0.25
CHMP4BP1-201ENST00000556017 IGKV3D-11A0A0A0MRZ8 115 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SDR42E2A6NKP2 422 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 GOLGA8MH3BSY2 632 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NME2P1O60361 137 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 GALR3O60755 368 aaPredicted RBP13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 IGFBP2P18065 325 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NME2P22392 152 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 TPP2P29144 1249 aaPredicted RBP13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CDKN2DP55273 166 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 OLR1P78380 273 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MEF2AQ02078 507 aaPredicted RBP13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 DHX9Q08211 1270 aaKnown RBP13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 HYAL2Q12891 473 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RBM20Q5T481 1227 aaKnown RBP13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 C17orf64Q86WR6 236 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 RPS19BP1Q86WX3 136 aaKnown RBP13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MARVELD2Q8N4S9 558 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NAT8LQ8N9F0 302 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PHF10Q8WUB8 498 aaKnown RBP13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 C14orf79Q96F83 325 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MAGED4Q96JG8 741 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 NDNQ99608 321 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 LPAR4Q99677 370 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 SPOCK3Q9BQ16 436 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 PARVBQ9HBI1 364 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 IKZF3Q9UKT9 509 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 CLDN16Q9Y5I7 305 aa13.46□□□□□ -0.25
CHMP4BP1-201ENST00000556017 MAGEB16A2A368 324 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms