RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 IGHV5-51A0A0C4DH38 117 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 IGHV5-10-1A0A0J9YXX1 117 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 A0A1B0GTL3 188 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ATP6AP2A0A1C7CYW4 349 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 GNG14A0A1W2PPG7 69 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 A0A1W2PQM1 296 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 TMEM150CB9EJG8 249 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 NTN3O00634 580 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-220ENST00000555634 GDF9O60383 454 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 CBFA2T3O75081 653 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 GUCY1B2O75343 617 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ATP6AP2O75787 350 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 OR2B3O76000 313 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 MSL3P1P0C860 447 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 IDO1P14902 403 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ACPPP15309 386 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 NELFEP18615 380 aaKnown RBP10.7□□□□□ -0.7
SHMT2-220ENST00000555634 NCF2P19878 526 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-220ENST00000555634 PRPH2P23942 346 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 EPHA3P29320 983 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 IDH3AP50213 366 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 HTR6P50406 440 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 NEK2P51955 445 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ITGA1P56199 1179 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 VSX2P58304 361 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-220ENST00000555634 FOXM1Q08050 763 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 HERC3Q15034 1050 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 AP5B1Q2VPB7 878 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 DEFB110Q30KQ9 67 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 XKR7Q5GH72 579 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 YOD1Q5VVQ6 348 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-220ENST00000555634 METTL21CQ5VZV1 264 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 TLDC1Q6P9B6 456 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 CYP20A1Q6UW02 462 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 PIP4P1Q86T03 277 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 BPHLQ86WA6 291 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ZFAND4Q86XD8 727 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 PLD3Q8IV08 490 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ZNF740Q8NDX6 193 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 DEFB124Q8NES8 71 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 OR2L5Q8NG80 312 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 RFWD2Q8NHY2 731 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 NT5CQ8TCD5 201 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 SLC41A2Q96JW4 573 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ZBTB18Q99592 522 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 NDC1Q9BTX1 674 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 MS4A8Q9BY19 250 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ACPTQ9BZG2 426 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 FARSBQ9NSD9 589 aaKnown RBP10.7□□□□□ -0.7
SHMT2-220ENST00000555634 TXLNGQ9NUQ3 528 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 RARRES3Q9UL19 164 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 ASXL3Q9C0F0 2248 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 NUP210LQ5VU65 1888 aa10.7□□□□□ -0.7
SHMT2-220ENST00000555634 E9PBE3 544 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 H0YGG7 62 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 SDHDO14521 159 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 LSM1O15116 133 aaKnown RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 UBDO15205 165 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 ERI3O43414 337 aaKnown RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 KIF1CO43896 1103 aaKnown RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 PCDH7O60245 1069 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 KLHL41O60662 606 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 CTSVO60911 334 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 PEX11AO75192 247 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 TGFB1P01137 390 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 HBQ1P09105 142 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 CEACAM1P13688 526 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 TGM1P22735 817 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 CCKBRP32239 447 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 HPCAL1P37235 193 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 RPL3P39023 403 aaKnown RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 ASMTP46597 345 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 ARSFP54793 590 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 RAB15P59190 212 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 ARF3P61204 181 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 HMGCS1Q01581 520 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 EIF3IQ13347 325 aaKnown RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 GSTA3Q16772 222 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 MUM1Q2TAK8 710 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 FAM214AQ32MH5 1076 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 UGT3A2Q3SY77 523 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 SLC9B1Q4ZJI4 515 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 VWA5B1Q5TIE3 1220 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 GARNL3Q5VVW2 1013 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 OGFOD2Q6N063 350 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 SCIMPQ6UWF3 145 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 MCATQ8IVS2 390 aaKnown RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 D2HGDHQ8N465 521 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 ANKRD53Q8N9V6 530 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 C10orf82Q8WW14 230 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 KLHL6Q8WZ60 621 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 MAELQ96JY0 434 aaKnown RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 LRRC37BQ96QE4 947 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 OR2A5Q96R48 311 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 SPNS1Q9H2V7 528 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 ANKHQ9HCJ1 492 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 TNFRSF12AQ9NP84 129 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 FGF21Q9NSA1 209 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 ADAM29Q9UKF5 820 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 PILRAQ9UKJ1 303 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms