RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	LGALS12	Q96DT0	336 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	PDLIM5	Q96HC4	596 aa	Known RBP	4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	LRR1	Q96L50	414 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	FUCA2	Q9BTY2	467 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	MRPL9	Q9BYD2	267 aa	Known RBP	4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	RPF1	Q9H9Y2	349 aa	Known RBP	4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	TMOD3	Q9NYL9	352 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	SPG21	Q9NZD8	308 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	TRPC4	Q9UBN4	977 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	FBXL4	Q9UKA2	621 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	ELF5	Q9UKW6	265 aa	Predicted RBP	4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	ITM2B	Q9Y287	266 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	NCKAP1	Q9Y2A7	1128 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	WDR37	Q9Y2I8	494 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	ANGPTL3	Q9Y5C1	460 aa		4.08	□□□□□ -1.76
KTN1-223	ENST00000555573	SCO2	O43819	266 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SAP30	O75446	220 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	CEBPB	P17676	345 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SRD5A2	P31213	254 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	OR3A2	P47893	321 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SERPINH1	P50454	418 aa	Known RBP	4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	FKBP1B	P68106	108 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	RPP38	P78345	283 aa	Known RBP	4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	UBXN1	Q04323	297 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SGCG	Q13326	291 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.07	□□□□□ -1.76	3e-7	■■■■■ 31.7
KTN1-223	ENST00000555573	SGCB	Q16585	318 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	FUT11	Q495W5	492 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	C9orf50	Q5SZB4	431 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	PWWP2B	Q6NUJ5	590 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	BHLHB9	Q6PI77	547 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	NOTCH2NL	Q7Z3S9	236 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	HOGA1	Q86XE5	327 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	LSMEM2	Q8N112	164 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	RAB42	Q8N4Z0	105 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	TCEANC	Q8N8B7	351 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	DDHD1	Q8NEL9	900 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	ARHGAP45	Q92619	1136 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	RFT1	Q96AA3	541 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	ZNF486	Q96H40	463 aa	Predicted RBP	4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	C2orf48	Q96LS8	159 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	CCDC43	Q96MW1	224 aa	Known RBP	4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	LITAF	Q99732	161 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	NACAP1	Q9BZK3	213 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	NYX	Q9GZU5	481 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	P2RY12	Q9H244	342 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	MID1IP1	Q9NPA3	183 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	PNPLA3	Q9NST1	481 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	HACD3	Q9P035	362 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	GAB2	Q9UQC2	676 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	TMED7	Q9Y3B3	224 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573		A0A087X0K7	114 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573		A8MVM7	634 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	MLNR	O43193	412 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	CYTIP	O60759	359 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	MT-ND2	P03891	347 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SBK2	P0C263	348 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	PRKAR1A	P10644	381 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SOX3	P41225	446 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	OR3A3	P47888	321 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	PAX9	P55771	341 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	XG	P55808	180 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	KIAA1024L	P59773	190 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	AP1B1	Q10567	949 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	AARD	Q4LEZ3	155 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	ARMCX4	Q5H9R4	360 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	AGAP6	Q5VW22	663 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	ARHGAP11A	Q6P4F7	1023 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	ASPG	Q86U10	573 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	LPCAT1	Q8NF37	534 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	MGARP	Q8TDB4	240 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	ZNRF4	Q8WWF5	429 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	SNX21	Q969T3	373 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	EPSTI1	Q96J88	318 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	DPEP2	Q9H4A9	486 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	EXOC1	Q9NV70	894 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573	FBXW2	Q9UKT8	454 aa		4.07	□□□□□ -1.76
KTN1-223	ENST00000555573		A0A087X002	238 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	MAGEB16	A2A368	324 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	PRR23D1	E9PI22	279 aa	Predicted RBP	4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	RTCA	O00442	366 aa	Known RBP	4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	SNRPD1	P62314	119 aa	Known RBP	4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	TEF	Q10587	303 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	CDH18	Q13634	790 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	RPS6KA1	Q15418	735 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	CCDC6	Q16204	474 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	DUSP5	Q16690	384 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	C2orf76	Q3KRA6	126 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	IFI44L	Q53G44	452 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	ADAMTSL4-AS1	Q5T5F5	129 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	KCTD11	Q693B1	232 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	ZNF329	Q86UD4	541 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	RNASE8	Q8TDE3	154 aa	Known RBP	4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	ST7L	Q8TDW4	575 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	MAGED4	Q96JG8	741 aa		4.06	□□□□□ -1.76
KTN1-223	ENST00000555573	ACAT2	Q9BWD1	397 aa		4.06	□□□□□ -1.76

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