RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ZNF740Q8NDX6 193 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 CATSPER1Q8NEC5 780 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 ANKRD49Q8WVL7 239 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 CYTH2Q99418 400 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 UNKQ9C0B0 810 aaKnown RBP23.1■■□□□ 1.29
PRKCH-216ENST00000555542 CAB39LQ9H9S4 337 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 PELI2Q9HAT8 420 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 ZFP69BQ9UJL9 534 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 HECTD1Q9ULT8 2610 aa23.1■■□□□ 1.29
PRKCH-216ENST00000555542 IGHV3-20A0A0C4DH32 117 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 ANKUB1A6NFN9 424 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 NCF1BA6NI72 391 aaPredicted RBP23.09■■□□□ 1.29
PRKCH-216ENST00000555542 NCF1CA8MVU1 366 aaPredicted RBP23.09■■□□□ 1.29
PRKCH-216ENST00000555542 CDC123O75794 336 aaPredicted RBP23.09■■□□□ 1.29
PRKCH-216ENST00000555542 WDR47O94967 919 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 ITGAMP11215 1152 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 NCF1P14598 390 aaPredicted RBP23.09■■□□□ 1.29
PRKCH-216ENST00000555542 AGTR2P50052 363 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 EFNA3P52797 238 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 PLTPP55058 493 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 CDKL1Q00532 357 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 USP10Q14694 798 aaKnown RBP23.09■■□□□ 1.29
PRKCH-216ENST00000555542 DEFB134Q4QY38 66 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 ABHD13Q7L211 337 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 CTAGE3PQ8IX95 158 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 OR1N1Q8NGS0 311 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 SSC4DQ8WTU2 575 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 PSMF1Q92530 271 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 MAGEB10Q96LZ2 347 aaPredicted RBP23.09■■□□□ 1.29
PRKCH-216ENST00000555542 CPNE1Q99829 537 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 SARGQ9BW04 601 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 PLA2G3Q9NZ20 509 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 GRHL1Q9NZI5 618 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 NTNG1Q9Y2I2 539 aa23.09■■□□□ 1.29
PRKCH-216ENST00000555542 MTO1Q9Y2Z2 717 aaKnown RBP23.09■■□□□ 1.29
PRKCH-216ENST00000555542 TCRBV9S1A1TA0A576 114 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 CXorf49A8MYA2 514 aaPredicted RBP23.08■■□□□ 1.29
PRKCH-216ENST00000555542 SEMA7AO75326 666 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 CBX6O95503 412 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 ZNF888P0CJ79 500 aaPredicted RBP23.08■■□□□ 1.29
PRKCH-216ENST00000555542 ALOX12P18054 663 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 SOX11P35716 441 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 HNF4AP41235 474 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 SCTRP47872 440 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 REEP5Q00765 189 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 CBLBQ13191 982 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 BTBD16Q32M84 506 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 ABHD17BQ5VST6 288 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 NIPAL1Q6NVV3 410 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 NXPE4Q6UWF7 544 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 FAM180AQ6UWF9 173 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 C3orf62Q6ZUJ4 267 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 SHISA5Q8N114 240 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 OR5T3Q8NGG3 340 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.08■■□□□ 1.29
PRKCH-216ENST00000555542 SPNS1Q9H2V7 528 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 TEKT2Q9UIF3 430 aa23.08■■□□□ 1.29
PRKCH-216ENST00000555542 FLNCQ14315 2725 aa23.08■■□□□ 1.28
PRKCH-216ENST00000555542 OR2W5A6NFC9 320 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 URADA6NGE7 173 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 PHGDHO43175 533 aaKnown RBP23.07■■□□□ 1.28
PRKCH-216ENST00000555542 F10P00742 488 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 GP1BBP13224 206 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 IL10P22301 178 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 AHRP35869 848 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 OLR1P78380 273 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 CAV1Q03135 178 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 ZNF33BQ06732 778 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 ACTN3Q08043 901 aaPredicted RBP23.07■■□□□ 1.28
PRKCH-216ENST00000555542 ABRAXAS2Q15018 415 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 ANKRD37Q7Z713 158 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 TRPV3Q8NET8 790 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 NT5CQ8TCD5 201 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 GRHL3Q8TE85 626 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 IMMP1LQ96LU5 166 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 OR1F2PQ96R84 312 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 RBBP8Q99708 897 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 DERL2Q9GZP9 239 aa23.07■■□□□ 1.28
PRKCH-216ENST00000555542 RP1L1Q8IWN7 2480 aaPredicted RBP23.07■■□□□ 1.28
PRKCH-216ENST00000555542 PTPN13Q12923 2485 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 A8MUI8 341 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 GALR3O60755 368 aaPredicted RBP23.06■■□□□ 1.28
PRKCH-216ENST00000555542 H2AFYO75367 372 aaKnown RBP23.06■■□□□ 1.28
PRKCH-216ENST00000555542 GSTA2P09210 222 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 CCDC166P0CW27 439 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 STMN1P16949 149 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 GP5P40197 560 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 NSDHLQ15738 373 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 SPATA6LQ8N4H0 392 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 AFAP1L2Q8N4X5 818 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 PSMG3-AS1Q96PY0 264 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 MCMBPQ9BTE3 642 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 WWOXQ9NZC7 414 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 COL12A1Q99715 3063 aa23.06■■□□□ 1.28
PRKCH-216ENST00000555542 TRAV17A0A0B4J275 112 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 CYSRT1A8MQ03 144 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 B3GALT4O96024 378 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 GNAZP19086 355 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 JAK1P23458 1154 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 GDF5P43026 501 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms