RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DUSP26Q9BV47 211 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 ILVBLA1L0T0 632 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 MGAT4DA6NG13 374 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 MED26O95402 600 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 CKBP12277 381 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 AMD1P17707 334 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 LSM11P83369 360 aaKnown RBP eCLIP16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 SPOUT1Q5T280 376 aaKnown RBP16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 TMIGD1Q6UXZ0 262 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 LAX1Q8IWV1 398 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 IQCF1Q8N6M8 205 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 ZFP41Q8N8Y5 198 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 VPS35Q96QK1 796 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 CITED4Q96RK1 184 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 PAQR5Q9NXK6 330 aaPredicted RBP16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 IFT52Q9Y366 437 aa16.44■□□□□ 0.22
PPP4R3A-208ENST00000555462 H3BN98 237 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 C9P02748 559 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 RPLP0P05388 317 aaKnown RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 CLEC2LP0C7M8 214 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 SLAMF1Q13291 335 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 PROX2Q3B8N5 592 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 ALG1LQ6GMV1 187 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 NXPE1Q8N323 547 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 PSD2Q9BQI7 771 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 OR51B5Q9H339 312 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 YARS2Q9Y2Z4 477 aaKnown RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 PCM1Q15154 2024 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 FNDC1Q4ZHG4 1894 aaPredicted RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 SLC35F4A4IF30 521 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRAMEF25A6NGN4 478 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 C6orf47O95873 294 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 HNF4AP41235 474 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 RGS6P49758 472 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 WNT3P56703 355 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 ARMC4Q5T2S8 1044 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 SHFQ7M4L6 423 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 TSEN54Q7Z6J9 526 aaKnown RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 USP7Q93009 1102 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 ITPKCQ96DU7 683 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 TOR4AQ9NXH8 423 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 NDUFAF4Q9P032 175 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 FNIP2Q9P278 1114 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 SCN4AP35499 1836 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 A0A0G2JN53 185 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 NUAK1O60285 661 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 JUNDP17535 347 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 AOAHP28039 575 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 SNRPD2P62316 118 aaKnown RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 KCNJ10P78508 379 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 DSC1Q08554 894 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 ELP6Q0PNE2 266 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 BAK1Q16611 211 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 THOC7Q6I9Y2 204 aaKnown RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 TNFAIP8L2Q6P589 184 aaPredicted RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 PAMR1Q6UXH9 720 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 PTCHD4Q6ZW05 846 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 NLRP8Q86W28 1048 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 TAGAPQ8N103 731 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 DNAJC22Q8N4W6 341 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 SORCS1Q8WY21 1168 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 CTRCQ99895 268 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 SGK2Q9HBY8 427 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 FBXL12Q9NXK8 326 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 ZNF226Q9NYT6 803 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 KLHL20Q9Y2M5 609 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 TMED5Q9Y3A6 229 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 PCDHB1Q9Y5F3 818 aa16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
PPP4R3A-208ENST00000555462 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 FAM47E-STBD1D6RA91 191 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 SMLR1H3BR10 107 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 ZW10O43264 779 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 APOA1P02647 267 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 IFI30P13284 250 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 ACVR2AP27037 513 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 HOXC8P31273 242 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 CD70P32970 193 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 CAP1Q01518 475 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 STARD3Q14849 445 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 LRRC26Q2I0M4 334 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 CPTPQ5TA50 214 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 RAB8BQ92930 207 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 TRMT61AQ96FX7 289 aaKnown RBP16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 MGLLQ99685 303 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 NUFIP1Q9UHK0 495 aaKnown RBP16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 RPS6KA6Q9UK32 745 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 ALPK2Q86TB3 2170 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 GPR17Q13304 367 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 CRHR2Q13324 411 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 DOC2AQ14183 400 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 ZNF385BQ569K4 471 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 ATAD3CQ5T2N8 411 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 C10orf62Q5T681 223 aaPredicted RBP16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 AQP11Q8NBQ7 271 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 SCLYQ96I15 445 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 MARCH5Q9NX47 278 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 PSORS1C1Q9UIG5 152 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms