RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 EFCAB11Q9BUY7 163 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 CD244Q9BZW8 370 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 SEMA4CQ9C0C4 833 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 PITHD1Q9GZP4 211 aaPredicted RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 EHD1Q9H4M9 534 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 P4HTMQ9NXG6 502 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 C3orf18Q9UK00 162 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 TMCO1Q9UM00 188 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 RP1L1Q8IWN7 2480 aaPredicted RBP11.48□□□□□ -0.57
SRP54-206ENST00000555317 ANKDD1BA6NHY2 528 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 VSTM2BA6NLU5 285 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 SGK494L7N484 410 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 AGPSO00116 658 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 MAP2K7O14733 419 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 FFAR3O14843 346 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 GPR42O15529 346 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 FOXS1O43638 330 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 KLHL41O60662 606 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 SMIM24O75264 130 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 DNAJB5O75953 348 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 KLHL18O94889 574 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 UMODP07911 640 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 COL6A2P12110 1019 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 EPB42P16452 691 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 GSTM2P28161 218 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 ARL1P40616 181 aaPredicted RBP11.48□□□□□ -0.57
SRP54-206ENST00000555317 PIK3CGP48736 1102 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 PGDP52209 483 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 ALDH18A1P54886 795 aaKnown RBP11.48□□□□□ -0.57
SRP54-206ENST00000555317 FOXL2P58012 376 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 STXBP1P61764 594 aaKnown RBP11.48□□□□□ -0.57
SRP54-206ENST00000555317 IRF8Q02556 426 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 PFKFB4Q16877 469 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 PPP1R32Q7Z5V6 425 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.48□□□□□ -0.57
SRP54-206ENST00000555317 NT5CQ8TCD5 201 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 UBE2E3Q969T4 207 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 ISL2Q96A47 359 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 ESAMQ96AP7 390 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 TM4SF19Q96DZ7 209 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 ABHD17AQ96GS6 310 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 SEC16BQ96JE7 1060 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 FAR2Q96K12 515 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 SLC25A23Q9BV35 468 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 SPNS1Q9H2V7 528 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 ZNF71Q9NQZ8 489 aaPredicted RBP11.48□□□□□ -0.57
SRP54-206ENST00000555317 HCN3Q9P1Z3 774 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 FETUBQ9UGM5 382 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 FBXL4Q9UKA2 621 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 MRPS2Q9Y399 296 aaKnown RBP11.48□□□□□ -0.57
SRP54-206ENST00000555317 NAALAD2Q9Y3Q0 740 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 TNPO3Q9Y5L0 923 aaKnown RBP11.48□□□□□ -0.57
SRP54-206ENST00000555317 SLC22A7Q9Y694 548 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 NUP210LQ5VU65 1888 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 CNTRLQ7Z7A1 2325 aa11.48□□□□□ -0.57
SRP54-206ENST00000555317 A0A088AWK7 358 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 A6NL46 340 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 IDSB3KWA1 339 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 K7EPI3 171 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 PCDH17O14917 1159 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 RDH16O75452 317 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 SERPINA6P08185 405 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ZNF888P0CJ79 500 aaPredicted RBP11.47□□□□□ -0.57
SRP54-206ENST00000555317 MYBL2P10244 700 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ACPPP15309 386 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ALOX12P18054 663 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ZNF10P21506 573 aaPredicted RBP11.47□□□□□ -0.57
SRP54-206ENST00000555317 HNF4AP41235 474 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 MAGEA12P43365 314 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 XCR1P46094 333 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 KCNC1P48547 511 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 AGTR2P50052 363 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 CSRP3P50461 194 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 EMP2P54851 167 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 MAT1AQ00266 395 aaKnown RBP11.47□□□□□ -0.57
SRP54-206ENST00000555317 TGM3Q08188 693 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 CHIT1Q13231 466 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 SETDB1Q15047 1291 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 TUBB8Q3ZCM7 444 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 MINDY4Q4G0A6 757 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 DEFB134Q4QY38 66 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 VWA2Q5GFL6 755 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 TOR1AIP1Q5JTV8 583 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 DCAF10Q5QP82 559 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 PRICKLE2Q7Z3G6 844 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 MYLK4Q86YV6 388 aaPredicted RBP11.47□□□□□ -0.57
SRP54-206ENST00000555317 ZNF843Q8N446 348 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ARHGEF39Q8N4T4 335 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 TEX9Q8N6V9 391 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 AMER3Q8N944 861 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ANKRD53Q8N9V6 530 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 OR51Q1Q8NH59 317 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 METTL21AQ8WXB1 218 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 MRPL57Q9BQC6 102 aaKnown RBP11.47□□□□□ -0.57
SRP54-206ENST00000555317 TRIM55Q9BYV6 548 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 TXLNGYQ9BZA5 131 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 PPCSQ9HAB8 311 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 GPR83Q9NYM4 423 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms